Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
ALDH1A1P00352 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ALDH1A1P00352 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ALDH1A1P00352 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ALDH1A1P00352 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ALDH1A1P00352 AC068647.1-201ENST00000489539 2265 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ALDH1A1P00352 MIR367-201ENST00000362299 68 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 SNORD114-19-201ENST00000363072 75 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 MIR548A1-201ENST00000385041 97 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 AL139247.1-201ENST00000422768 325 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 OR2AH1P-201ENST00000425717 928 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.66□□□□□ -1.66
ALDH1A1P00352 RPL31P41-201ENST00000477967 372 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 AC106707.2-201ENST00000484182 374 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 RNU1-103P-201ENST00000516502 125 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 RNU6-107P-201ENST00000516643 102 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 SNORA31.16-201ENST00000516773 139 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 CKS1BP7-201ENST00000522230 235 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 AC025627.2-201ENST00000576220 160 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 MIR378D2-201ENST00000580636 98 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 AC015813.4-201ENST00000610469 179 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.66□□□□□ -1.66
ALDH1A1P00352 MIR6715B-201ENST00000637172 77 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 MIR3529-201ENST00000637713 78 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
ALDH1A1P00352 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
ALDH1A1P00352 AC000123.3-201ENST00000624029 4975 ntBASIC4.66□□□□□ -1.66
ALDH1A1P00352 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.66□□□□□ -1.66
ALDH1A1P00352 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ALDH1A1P00352 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ALDH1A1P00352 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.66□□□□□ -1.66
ALDH1A1P00352 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ALDH1A1P00352 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ALDH1A1P00352 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.65□□□□□ -1.66
ALDH1A1P00352 AP001273.1-201ENST00000624493 3152 ntBASIC4.65□□□□□ -1.66
ALDH1A1P00352 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
ALDH1A1P00352 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ALDH1A1P00352 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ALDH1A1P00352 SNORD45.3-201ENST00000363836 72 ntBASIC4.65□□□□□ -1.67
ALDH1A1P00352 MIRLET7F2-201ENST00000385277 83 ntBASIC4.65□□□□□ -1.67
ALDH1A1P00352 SNORA48.5-201ENST00000391143 135 ntBASIC4.65□□□□□ -1.67
ALDH1A1P00352 FTH1P15-201ENST00000406984 280 ntBASIC4.65□□□□□ -1.67
ALDH1A1P00352 AL590383.1-201ENST00000428602 75 ntBASIC4.65□□□□□ -1.67
ALDH1A1P00352 RPL26P9-201ENST00000457466 433 ntBASIC4.65□□□□□ -1.67
ALDH1A1P00352 RPL32P34-201ENST00000486380 400 ntBASIC4.65□□□□□ -1.67
ALDH1A1P00352 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
ALDH1A1P00352 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
ALDH1A1P00352 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
ALDH1A1P00352 AC004925.1-201ENST00000624256 2706 ntBASIC4.65□□□□□ -1.67
ALDH1A1P00352 ADAM3A-203ENST00000461344 2157 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 Z73965.1-201ENST00000623412 2297 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 RNU6-778P-201ENST00000363269 103 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 Y_RNA.361-201ENST00000365515 120 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 Y_RNA.558-201ENST00000384685 113 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 RNVU1-14-201ENST00000384770 164 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 MIR218-2-201ENST00000385006 110 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 RNU6-383P-201ENST00000410864 94 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.64□□□□□ -1.67
ALDH1A1P00352 AL035423.1-201ENST00000420331 213 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 AC004386.2-201ENST00000441858 148 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.64□□□□□ -1.67
ALDH1A1P00352 AC125238.1-201ENST00000448842 249 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.64□□□□□ -1.67
ALDH1A1P00352 Y_RNA.649-201ENST00000459077 103 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 RPS26P45-201ENST00000471748 340 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 AC091178.2-201ENST00000584401 117 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 AL031274.2-201ENST00000599419 203 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 MAPK10-303ENST00000641324 3959 ntBASIC4.64□□□□□ -1.67
ALDH1A1P00352 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ALDH1A1P00352 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
ALDH1A1P00352 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ALDH1A1P00352 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ALDH1A1P00352 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ALDH1A1P00352 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.64□□□□□ -1.67
ALDH1A1P00352 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.64□□□□□ -1.67
ALDH1A1P00352 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ALDH1A1P00352 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
ALDH1A1P00352 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.63□□□□□ -1.67
ALDH1A1P00352 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.63□□□□□ -1.67
ALDH1A1P00352 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ALDH1A1P00352 RNU6-140P-201ENST00000384566 108 ntBASIC4.63□□□□□ -1.67
ALDH1A1P00352 MIR320B2-201ENST00000408479 138 ntBASIC4.63□□□□□ -1.67
ALDH1A1P00352 RNU6-554P-201ENST00000410466 106 ntBASIC4.63□□□□□ -1.67
ALDH1A1P00352 AC019205.3-201ENST00000424573 156 ntBASIC4.63□□□□□ -1.67
ALDH1A1P00352 AC092047.1-201ENST00000424997 240 ntBASIC4.63□□□□□ -1.67
ALDH1A1P00352 CYCSP35-201ENST00000451978 304 ntBASIC4.63□□□□□ -1.67
ALDH1A1P00352 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.63□□□□□ -1.67
ALDH1A1P00352 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.63□□□□□ -1.67
ALDH1A1P00352 RNU6-781P-201ENST00000516377 101 ntBASIC4.63□□□□□ -1.67
ALDH1A1P00352 SNORA70.16-201ENST00000516390 95 ntBASIC4.63□□□□□ -1.67
ALDH1A1P00352 AC093331.1-201ENST00000521474 169 ntBASIC4.63□□□□□ -1.67
ALDH1A1P00352 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.63□□□□□ -1.67
ALDH1A1P00352 SNRPGP20-201ENST00000604477 205 ntBASIC4.63□□□□□ -1.67
ALDH1A1P00352 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.63□□□□□ -1.67
ALDH1A1P00352 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ALDH1A1P00352 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ALDH1A1P00352 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
ALDH1A1P00352 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
ALDH1A1P00352 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms