Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.37□□□□□ -1.87
CNOT4O95628 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.37□□□□□ -1.87
CNOT4O95628 AL133162.1-201ENST00000463228 453 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 SNORA74D-201ENST00000516404 141 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.37□□□□□ -1.87
CNOT4O95628 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.37□□□□□ -1.87
CNOT4O95628 MIR5695-201ENST00000579717 85 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 AC072026.1-201ENST00000605023 201 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 SNORA43.4-201ENST00000629559 138 ntBASIC3.37□□□□□ -1.87
CNOT4O95628 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.37□□□□□ -1.87
CNOT4O95628 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.37□□□□□ -1.87
CNOT4O95628 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CNOT4O95628 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNOT4O95628 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNOT4O95628 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNOT4O95628 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CNOT4O95628 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CNOT4O95628 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.36□□□□□ -1.87
CNOT4O95628 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CNOT4O95628 RNA5SP72-201ENST00000364442 117 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 Y_RNA.275-201ENST00000364726 110 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 RNU1-140P-201ENST00000365040 165 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CNOT4O95628 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNOT4O95628 RNU6-47P-201ENST00000383866 107 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 U8.10-201ENST00000384260 133 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 MIR10B-201ENST00000385011 110 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 HLFP1-201ENST00000402375 499 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 Y_RNA.590-201ENST00000410140 107 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.36□□□□□ -1.87
CNOT4O95628 AC245291.1-201ENST00000419501 328 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.36□□□□□ -1.87
CNOT4O95628 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.36□□□□□ -1.87
CNOT4O95628 WARS2P1-201ENST00000429678 537 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 HMGN2P31-201ENST00000432430 273 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 RPL27AP5-201ENST00000469428 449 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 AC117440.1-201ENST00000474107 571 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.36□□□□□ -1.87
CNOT4O95628 AC074198.2-201ENST00000508153 258 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.36□□□□□ -1.87
CNOT4O95628 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.36□□□□□ -1.87
CNOT4O95628 AC087499.8-201ENST00000578406 226 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 AL137849.1-201ENST00000604767 169 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNOT4O95628 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 AC002064.3-201ENST00000623448 346 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 AC132825.6-201ENST00000638861 357 ntBASIC3.36□□□□□ -1.87
CNOT4O95628 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNOT4O95628 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CNOT4O95628 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.36□□□□□ -1.87
CNOT4O95628 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.36□□□□□ -1.87
CNOT4O95628 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNOT4O95628 AC073346.2-201ENST00000624724 2058 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CNOT4O95628 FAM35CP-201ENST00000554755 2470 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.35□□□□□ -1.87
CNOT4O95628 SNORD56.1-201ENST00000362913 68 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 RNU6-1159P-201ENST00000362933 107 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 RNU6-137P-201ENST00000363680 108 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 RNU1-100P-201ENST00000365255 165 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 RNU6-281P-201ENST00000384212 103 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 Y_RNA.570-201ENST00000384750 101 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 MIR548I2-201ENST00000408348 149 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 RN7SKP220-201ENST00000410611 288 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 RNU2-61P-201ENST00000411069 191 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 RNU6-1001P-201ENST00000411265 100 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 RPS29P4-201ENST00000414733 161 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 AL358075.3-201ENST00000426289 226 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 AC009414.1-201ENST00000427200 443 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.35□□□□□ -1.87
CNOT4O95628 AC109925.1-201ENST00000478069 331 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 AC097462.2-201ENST00000504623 481 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 RNU6-1278P-201ENST00000516130 107 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 Y_RNA.679-201ENST00000516416 91 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 RNU6-567P-201ENST00000516746 107 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.35□□□□□ -1.87
CNOT4O95628 AC090877.1-201ENST00000561418 344 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.35□□□□□ -1.87
CNOT4O95628 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.35□□□□□ -1.87
CNOT4O95628 AC019159.1-201ENST00000605094 187 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 MIR6134-201ENST00000617606 109 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.35□□□□□ -1.87
CNOT4O95628 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CNOT4O95628 AC006504.1-201ENST00000562493 3666 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.35□□□□□ -1.87
CNOT4O95628 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CNOT4O95628 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CNOT4O95628 AC058791.1-201ENST00000608412 3198 ntBASIC3.35□□□□□ -1.87
CNOT4O95628 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CNOT4O95628 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNOT4O95628 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNOT4O95628 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CNOT4O95628 RNU6-626P-201ENST00000363354 107 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 U8.11-201ENST00000384699 133 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 U8.12-201ENST00000384701 133 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 RNU6-159P-201ENST00000391080 106 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 RNU6-651P-201ENST00000411040 105 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.34□□□□□ -1.87
CNOT4O95628 MTATP6P29-201ENST00000415057 132 ntBASIC3.34□□□□□ -1.87
CNOT4O95628 AL390729.2-201ENST00000416137 156 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms