Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 RNU6-232P-201ENST00000517144 64 ntBASIC1.23□□□□□ -2.21
BRD4O60885 AC106038.2-201ENST00000520706 568 ntBASIC1.23□□□□□ -2.21
BRD4O60885 AP003392.2-201ENST00000527269 208 ntBASIC1.23□□□□□ -2.21
BRD4O60885 CBX3P8-201ENST00000532412 525 ntBASIC1.23□□□□□ -2.21
BRD4O60885 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.23□□□□□ -2.21
BRD4O60885 MIR5692A1-201ENST00000580523 69 ntBASIC1.23□□□□□ -2.21
BRD4O60885 MIR3682-201ENST00000581338 84 ntBASIC1.23□□□□□ -2.21
BRD4O60885 AL022161.1-201ENST00000604390 213 ntBASIC1.23□□□□□ -2.21
BRD4O60885 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.23□□□□□ -2.21
BRD4O60885 AC079248.2-201ENST00000623779 326 ntBASIC1.23□□□□□ -2.21
BRD4O60885 AC019226.2-201ENST00000625973 424 ntBASIC1.23□□□□□ -2.21
BRD4O60885 RNU6-942P-201ENST00000363002 107 ntBASIC1.22□□□□□ -2.21
BRD4O60885 SNORA75B-201ENST00000384053 137 ntBASIC1.22□□□□□ -2.21
BRD4O60885 Y_RNA.458-201ENST00000384240 102 ntBASIC1.22□□□□□ -2.21
BRD4O60885 RNU6-72P-201ENST00000384285 79 ntBASIC1.22□□□□□ -2.21
BRD4O60885 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
BRD4O60885 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.22□□□□□ -2.21
BRD4O60885 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.22□□□□□ -2.21
BRD4O60885 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.22□□□□□ -2.21
BRD4O60885 MTND1P22-201ENST00000510572 951 ntBASIC1.22□□□□□ -2.21
BRD4O60885 AC112206.3-201ENST00000514578 389 ntBASIC1.22□□□□□ -2.21
BRD4O60885 RNU2-53P-201ENST00000516257 147 ntBASIC1.22□□□□□ -2.21
BRD4O60885 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.22□□□□□ -2.21
BRD4O60885 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.22□□□□□ -2.21
BRD4O60885 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.22□□□□□ -2.21
BRD4O60885 AC093249.1-201ENST00000567049 203 ntBASIC1.22□□□□□ -2.21
BRD4O60885 AC073410.2-201ENST00000603240 332 ntBASIC1.22□□□□□ -2.21
BRD4O60885 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.22□□□□□ -2.21
BRD4O60885 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.22□□□□□ -2.21
BRD4O60885 AC093788.1-201ENST00000609356 927 ntBASIC1.22□□□□□ -2.21
BRD4O60885 uc_338.15-201ENST00000615470 191 ntBASIC1.22□□□□□ -2.21
BRD4O60885 AF246928.1-201ENST00000623768 87 ntBASIC1.22□□□□□ -2.21
BRD4O60885 AL157786.1-207ENST00000627771 695 ntBASIC1.22□□□□□ -2.21
BRD4O60885 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
BRD4O60885 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.21□□□□□ -2.21
BRD4O60885 RNU6-1010P-201ENST00000362757 107 ntBASIC1.21□□□□□ -2.21
BRD4O60885 RNU6-179P-201ENST00000363350 107 ntBASIC1.21□□□□□ -2.21
BRD4O60885 RNU6-371P-201ENST00000364283 108 ntBASIC1.21□□□□□ -2.21
BRD4O60885 RNY4P34-201ENST00000364779 95 ntBASIC1.21□□□□□ -2.21
BRD4O60885 SNORD116-20-201ENST00000384529 92 ntBASIC1.21□□□□□ -2.21
BRD4O60885 RNU6-387P-201ENST00000411331 105 ntBASIC1.21□□□□□ -2.21
BRD4O60885 CALM2P2-201ENST00000428512 440 ntBASIC1.21□□□□□ -2.21
BRD4O60885 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.21□□□□□ -2.21
BRD4O60885 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.21□□□□□ -2.21
BRD4O60885 RBBP4P6-201ENST00000508098 202 ntBASIC1.21□□□□□ -2.21
BRD4O60885 Vault.3-201ENST00000516676 95 ntBASIC1.21□□□□□ -2.21
BRD4O60885 RNU2-46P-201ENST00000517038 113 ntBASIC1.21□□□□□ -2.21
BRD4O60885 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.21□□□□□ -2.21
BRD4O60885 AC022616.3-201ENST00000523940 148 ntBASIC1.21□□□□□ -2.21
BRD4O60885 COPS8P3-201ENST00000526024 482 ntBASIC1.21□□□□□ -2.21
BRD4O60885 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.21□□□□□ -2.21
BRD4O60885 AC022616.8-201ENST00000533569 253 ntBASIC1.21□□□□□ -2.21
BRD4O60885 AP003034.1-201ENST00000534621 422 ntBASIC1.21□□□□□ -2.21
BRD4O60885 AC087883.1-201ENST00000551882 391 ntBASIC1.21□□□□□ -2.21
BRD4O60885 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.21□□□□□ -2.21
BRD4O60885 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.21□□□□□ -2.21
BRD4O60885 AC008521.1-201ENST00000587471 187 ntBASIC1.21□□□□□ -2.21
BRD4O60885 BNIP3P30-201ENST00000601184 574 ntBASIC1.21□□□□□ -2.21
BRD4O60885 AC012065.4-201ENST00000602445 679 ntBASIC1.21□□□□□ -2.21
BRD4O60885 AL353778.1-201ENST00000603149 408 ntBASIC1.21□□□□□ -2.21
BRD4O60885 FAM71BP1-201ENST00000604431 523 ntBASIC1.21□□□□□ -2.21
BRD4O60885 AC092354.1-201ENST00000606057 376 ntBASIC1.21□□□□□ -2.21
BRD4O60885 SNORD3E-201ENST00000362899 217 ntBASIC1.21□□□□□ -2.22
BRD4O60885 RNU6-271P-201ENST00000363858 105 ntBASIC1.21□□□□□ -2.22
BRD4O60885 RNU6-169P-201ENST00000365336 107 ntBASIC1.21□□□□□ -2.22
BRD4O60885 RNU6-61P-201ENST00000365528 109 ntBASIC1.21□□□□□ -2.22
BRD4O60885 MIR578-201ENST00000384828 96 ntBASIC1.21□□□□□ -2.22
BRD4O60885 RNA5SP390-201ENST00000410191 113 ntBASIC1.21□□□□□ -2.22
BRD4O60885 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
BRD4O60885 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.21□□□□□ -2.22
BRD4O60885 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.21□□□□□ -2.22
BRD4O60885 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.21□□□□□ -2.22
BRD4O60885 AL033528.1-201ENST00000453780 140 ntBASIC1.21□□□□□ -2.22
BRD4O60885 OR2A41P-201ENST00000473586 105 ntBASIC1.21□□□□□ -2.22
BRD4O60885 AC116562.3-201ENST00000506136 177 ntBASIC1.21□□□□□ -2.22
BRD4O60885 AC068587.5-201ENST00000528506 175 ntBASIC1.21□□□□□ -2.22
BRD4O60885 TRAV32-201ENST00000553993 340 ntBASIC1.21□□□□□ -2.22
BRD4O60885 AC137800.2-201ENST00000574375 120 ntBASIC1.21□□□□□ -2.22
BRD4O60885 MIR548AB-201ENST00000584917 84 ntBASIC1.21□□□□□ -2.22
BRD4O60885 AC091304.9-201ENST00000612091 226 ntBASIC1.21□□□□□ -2.22
BRD4O60885 AC008250.2-201ENST00000615261 205 ntBASIC1.21□□□□□ -2.22
BRD4O60885 MIR6513-201ENST00000621188 64 ntBASIC1.21□□□□□ -2.22
BRD4O60885 AC023510.2-201ENST00000622162 746 ntBASIC1.21□□□□□ -2.22
BRD4O60885 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.21□□□□□ -2.22
BRD4O60885 SCARNA4-202ENST00000625402 129 ntBASIC1.21□□□□□ -2.22
BRD4O60885 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.21□□□□□ -2.22
BRD4O60885 U6.114-201ENST00000636407 96 ntBASIC1.21□□□□□ -2.22
BRD4O60885 AC099654.13-201ENST00000639774 207 ntBASIC1.21□□□□□ -2.22
BRD4O60885 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
BRD4O60885 OR4G2P-201ENST00000328113 903 ntBASIC1.2□□□□□ -2.22
BRD4O60885 RNU6-529P-201ENST00000363383 104 ntBASIC1.2□□□□□ -2.22
BRD4O60885 RNU6-414P-201ENST00000363705 104 ntBASIC1.2□□□□□ -2.22
BRD4O60885 RNU6-553P-201ENST00000364047 96 ntBASIC1.2□□□□□ -2.22
BRD4O60885 RNU6-487P-201ENST00000365430 104 ntBASIC1.2□□□□□ -2.22
BRD4O60885 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
BRD4O60885 RNU6-439P-201ENST00000384188 106 ntBASIC1.2□□□□□ -2.22
BRD4O60885 RAP1BP3-201ENST00000407180 549 ntBASIC1.2□□□□□ -2.22
BRD4O60885 RPS3AP3-201ENST00000411933 242 ntBASIC1.2□□□□□ -2.22
BRD4O60885 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.2□□□□□ -2.22
BRD4O60885 C1DP2-201ENST00000418167 426 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms