Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 RPL23AP58-201ENST00000440453 469 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 AC068781.1-201ENST00000488231 618 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 AC022447.4-201ENST00000504053 364 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 AC091874.1-201ENST00000511402 339 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 RNU6-976P-201ENST00000516086 111 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 SCARNA17.1-201ENST00000516211 143 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 SNORA31.6-201ENST00000516241 130 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 RNA5SP76-201ENST00000516277 87 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 SCARNA17.2-201ENST00000516334 143 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 AC233981.2-201ENST00000611524 1614 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 SCARNA17.4-201ENST00000614296 143 ntBASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM43BA6NCK2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC092268.1-201ENST00000342691 405 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 U3.13-201ENST00000364804 214 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 SNORD42.2-201ENST00000365570 69 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 Y_RNA.445-201ENST00000384168 102 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 RN7SKP61-201ENST00000410642 295 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC244670.1-201ENST00000436879 112 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 GPM6BP3-201ENST00000442797 145 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC009296.1-201ENST00000443146 155 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC079354.2-201ENST00000453523 154 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC109329.1-201ENST00000518744 317 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 MIR5696-201ENST00000578474 85 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AL158827.2-201ENST00000602494 330 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC073410.2-201ENST00000603240 332 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC005014.2-201ENST00000607795 599 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC134503.1-201ENST00000633048 54 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AL691447.3-201ENST00000635020 330 ntBASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM43BA6NCK2 AC138915.1-201ENST00000565427 1685 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 RNU6-490P-201ENST00000362985 107 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 RNY1P16-201ENST00000363063 111 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 Y_RNA.128-201ENST00000363391 112 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 Y_RNA.138-201ENST00000363462 102 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 RNU6-1227P-201ENST00000383981 107 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 AL512633.1-201ENST00000399931 655 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 AL356057.3-201ENST00000402607 340 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 AC078809.1-201ENST00000427601 140 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 AL353705.4-201ENST00000449661 238 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 RPL17P19-201ENST00000489069 552 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 RPS29P21-201ENST00000496272 170 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 RNA5SP112-201ENST00000515937 99 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 AC079598.5-201ENST00000547460 117 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 AC016256.1-201ENST00000547971 354 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 AC107871.2-201ENST00000612894 502 ntBASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM43BA6NCK2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 AP000560.1-201ENST00000624150 1937 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 RNU6-595P-201ENST00000363944 107 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 RNU6-1286P-201ENST00000383871 107 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 MIR548P-201ENST00000408336 84 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 CYCSP48-201ENST00000417124 323 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 AC097463.2-201ENST00000421074 142 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 AC243428.1-201ENST00000421099 264 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 Y_RNA.631-201ENST00000459607 101 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 AC109329.2-201ENST00000519658 482 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 AL442663.2-201ENST00000554385 511 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 AC060766.3-201ENST00000591442 263 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 Z75746.1-201ENST00000440243 2080 ntBASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM43BA6NCK2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms