Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 KRT8P7-201ENST00000533003 1432 ntBASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCN10AQ9Y5Y9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 AC079781.3-201ENST00000449110 356 ntBASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 EMBP1-201ENST00000458200 901 ntBASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 PVRIG2P-201ENST00000435460 978 ntBASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 KRT18P23-201ENST00000435622 1283 ntBASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.77■□□□□ 0.92
SCN10AQ9Y5Y9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SCN10AQ9Y5Y9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SCN10AQ9Y5Y9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 RCC2P3-201ENST00000418112 1537 ntBASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 TREX1-205ENST00000625293 1783 ntBASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 TSPY19P-201ENST00000418461 509 ntBASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 TSPY18P-201ENST00000441642 509 ntBASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 AL031008.1-201ENST00000619963 541 ntBASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.76■□□□□ 0.91
SCN10AQ9Y5Y9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 FAAHP1-202ENST00000446499 1238 ntBASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 TOB2P1-201ENST00000469761 992 ntBASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 AC008556.1-201ENST00000610908 2040 ntBASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 AC125437.2-201ENST00000625180 2167 ntBASIC20.75■□□□□ 0.91
SCN10AQ9Y5Y9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCN10AQ9Y5Y9 AL512353.2-201ENST00000448759 1962 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms