Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.78■□□□□ 0.6
SNX11Q9Y5W9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX11Q9Y5W9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
SNX11Q9Y5W9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNX11Q9Y5W9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNX11Q9Y5W9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.59
SNX11Q9Y5W9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SNX11Q9Y5W9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX11Q9Y5W9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 AC026396.1-201ENST00000419388 421 ntBASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNX11Q9Y5W9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX11Q9Y5W9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms