Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 RCC2P3-201ENST00000418112 1537 ntBASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 Z83836.1-201ENST00000624605 1642 ntBASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 AC104819.1-201ENST00000504587 486 ntBASIC28.69■■■□□ 2.18
CDC42BPBQ9Y5S2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
CDC42BPBQ9Y5S2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CDC42BPBQ9Y5S2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CDC42BPBQ9Y5S2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDC42BPBQ9Y5S2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
CDC42BPBQ9Y5S2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
CDC42BPBQ9Y5S2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC28.68■■■□□ 2.18
CDC42BPBQ9Y5S2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC28.68■■■□□ 2.18
CDC42BPBQ9Y5S2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 KRT18P23-201ENST00000435622 1283 ntBASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 KRT16P4-201ENST00000453883 522 ntBASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 TP73-AS1-207ENST00000624167 988 ntBASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
CDC42BPBQ9Y5S2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 AL109659.2-201ENST00000606809 1674 ntBASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 AC120114.3-201ENST00000611923 658 ntBASIC28.66■■■□□ 2.18
CDC42BPBQ9Y5S2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CDC42BPBQ9Y5S2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
CDC42BPBQ9Y5S2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC28.64■■■□□ 2.18
CDC42BPBQ9Y5S2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC28.64■■■□□ 2.18
CDC42BPBQ9Y5S2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC28.64■■■□□ 2.18
CDC42BPBQ9Y5S2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC28.64■■■□□ 2.18
CDC42BPBQ9Y5S2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CDC42BPBQ9Y5S2 RNA5SP419-201ENST00000515908 135 ntBASIC28.64■■■□□ 2.18
CDC42BPBQ9Y5S2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC28.64■■■□□ 2.18
CDC42BPBQ9Y5S2 AL592071.1-201ENST00000611956 408 ntBASIC28.64■■■□□ 2.18
CDC42BPBQ9Y5S2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
CDC42BPBQ9Y5S2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC28.64■■■□□ 2.18
CDC42BPBQ9Y5S2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CDC42BPBQ9Y5S2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC28.64■■■□□ 2.17
CDC42BPBQ9Y5S2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC28.64■■■□□ 2.17
CDC42BPBQ9Y5S2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC28.64■■■□□ 2.17
CDC42BPBQ9Y5S2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 AC008556.1-201ENST00000610908 2040 ntBASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 KATNBL1P6-202ENST00000562413 1466 ntBASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC28.63■■■□□ 2.17
CDC42BPBQ9Y5S2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPBQ9Y5S2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPBQ9Y5S2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC28.62■■■□□ 2.17
CDC42BPBQ9Y5S2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC28.62■■■□□ 2.17
CDC42BPBQ9Y5S2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC28.62■■■□□ 2.17
CDC42BPBQ9Y5S2 HLA-A-201ENST00000376802 1334 ntBASIC28.62■■■□□ 2.17
CDC42BPBQ9Y5S2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPBQ9Y5S2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CDC42BPBQ9Y5S2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms