Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC116407.4-201ENST00000623319 1061 ntBASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 AL158211.5-201ENST00000623583 2518 ntBASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 KRT8P41-201ENST00000533985 1514 ntBASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 AC005332.1-201ENST00000577698 1310 ntBASIC17.72■□□□□ 0.43
PCDHGA9Q9Y5G4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 NEK4P2-201ENST00000580004 1012 ntBASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDHGA9Q9Y5G4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.71■□□□□ 0.42
PCDHGA9Q9Y5G4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 AL136038.3-201ENST00000561909 1096 ntBASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA9Q9Y5G4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms