Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHGB3Q9Y5G1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18■□□□□ 0.47
PCDHGB3Q9Y5G1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
PCDHGB3Q9Y5G1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 AL023875.1-201ENST00000640777 796 ntBASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB3Q9Y5G1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 AL049812.1-201ENST00000432563 2267 ntBASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 RARRES2P10-201ENST00000564312 460 ntBASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 Z99916.2-201ENST00000604037 246 ntBASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB3Q9Y5G1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 TEX21P-204ENST00000641479 1693 ntBASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 RPS2P55-201ENST00000397318 883 ntBASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 AC107956.1-201ENST00000494359 873 ntBASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 AC005082.1-201ENST00000413042 2259 ntBASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB3Q9Y5G1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms