Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 UBE2DNL-204ENST00000602536 740 ntBASIC16.92■□□□□ 0.3
SSR3Q9UNL2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.92■□□□□ 0.3
SSR3Q9UNL2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 AC004854.2-201ENST00000608450 1441 ntBASIC16.91■□□□□ 0.3
SSR3Q9UNL2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 MYCNOS-205ENST00000641950 531 ntBASIC16.91■□□□□ 0.3
SSR3Q9UNL2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.91■□□□□ 0.3
SSR3Q9UNL2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSR3Q9UNL2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSR3Q9UNL2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SSR3Q9UNL2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SSR3Q9UNL2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR3Q9UNL2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms