Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 AC135050.7-201ENST00000624508 2218 ntBASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 PRKY-204ENST00000533551 1019 ntBASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 RARRES2P10-201ENST00000564312 460 ntBASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 AC090164.3-201ENST00000610780 2143 ntBASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 IRX1P1-201ENST00000438849 1838 ntBASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RABGEF1Q9UJ41 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 AL512353.2-201ENST00000448759 1962 ntBASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 KRT17P2-201ENST00000300992 1314 ntBASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RABGEF1Q9UJ41 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 AC026471.1-201ENST00000564629 3026 ntBASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 AL135905.2-201ENST00000584934 1404 ntBASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 AP001412.1-201ENST00000608405 714 ntBASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RABGEF1Q9UJ41 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 AL121829.2-201ENST00000620908 328 ntBASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.43■□□□□ 0.7
RABGEF1Q9UJ41 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms