Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PPARGC1AQ9UBK2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 AL032819.2-201ENST00000624543 2162 ntBASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PPARGC1AQ9UBK2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 TEX21P-204ENST00000641479 1693 ntBASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 PRSS44-201ENST00000515154 1146 ntBASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PPARGC1AQ9UBK2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 AC096733.2-201ENST00000609937 1394 ntBASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 AC141586.3-201ENST00000562166 1838 ntBASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 KRT8P11-201ENST00000409686 1436 ntBASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 TSPY23P-201ENST00000440136 739 ntBASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 AC079598.2-202ENST00000546624 1451 ntBASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PPARGC1AQ9UBK2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms