Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 AC004408.2-201ENST00000623613 2777 ntBASIC19.18■□□□□ 0.66
HACD3Q9P035 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.18■□□□□ 0.66
HACD3Q9P035 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HACD3Q9P035 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HACD3Q9P035 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.18■□□□□ 0.66
HACD3Q9P035 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.18■□□□□ 0.66
HACD3Q9P035 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HACD3Q9P035 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HACD3Q9P035 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.18■□□□□ 0.66
HACD3Q9P035 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.18■□□□□ 0.66
HACD3Q9P035 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.18■□□□□ 0.66
HACD3Q9P035 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
HACD3Q9P035 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HACD3Q9P035 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.17■□□□□ 0.66
HACD3Q9P035 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HACD3Q9P035 FEM1AP3-201ENST00000403722 1741 ntBASIC19.17■□□□□ 0.66
HACD3Q9P035 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.17■□□□□ 0.66
HACD3Q9P035 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HACD3Q9P035 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HACD3Q9P035 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HACD3Q9P035 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HACD3Q9P035 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.17■□□□□ 0.66
HACD3Q9P035 AL355355.2-201ENST00000442321 338 ntBASIC19.17■□□□□ 0.66
HACD3Q9P035 FAM207BP-201ENST00000447172 505 ntBASIC19.17■□□□□ 0.66
HACD3Q9P035 AC011506.1-201ENST00000474329 610 ntBASIC19.17■□□□□ 0.66
HACD3Q9P035 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.17■□□□□ 0.66
HACD3Q9P035 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.17■□□□□ 0.66
HACD3Q9P035 DGCR10-201ENST00000609839 495 ntBASIC19.17■□□□□ 0.66
HACD3Q9P035 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.17■□□□□ 0.66
HACD3Q9P035 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HACD3Q9P035 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.17■□□□□ 0.66
HACD3Q9P035 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.17■□□□□ 0.66
HACD3Q9P035 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.17■□□□□ 0.66
HACD3Q9P035 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HACD3Q9P035 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
HACD3Q9P035 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.16■□□□□ 0.66
HACD3Q9P035 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.16■□□□□ 0.66
HACD3Q9P035 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.16■□□□□ 0.66
HACD3Q9P035 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.16■□□□□ 0.66
HACD3Q9P035 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HACD3Q9P035 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.16■□□□□ 0.66
HACD3Q9P035 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.16■□□□□ 0.66
HACD3Q9P035 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HACD3Q9P035 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
HACD3Q9P035 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HACD3Q9P035 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.16■□□□□ 0.66
HACD3Q9P035 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.16■□□□□ 0.66
HACD3Q9P035 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.16■□□□□ 0.66
HACD3Q9P035 AC026471.5-201ENST00000615068 467 ntBASIC19.16■□□□□ 0.66
HACD3Q9P035 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HACD3Q9P035 IRX1P1-201ENST00000438849 1838 ntBASIC19.16■□□□□ 0.66
HACD3Q9P035 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HACD3Q9P035 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.16■□□□□ 0.66
HACD3Q9P035 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.15■□□□□ 0.66
HACD3Q9P035 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
HACD3Q9P035 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.15■□□□□ 0.66
HACD3Q9P035 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HACD3Q9P035 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms