Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNTNAP3Q9BZ76 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 MED15P5-201ENST00000423150 992 ntBASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 KRT16P6-202ENST00000425692 1426 ntBASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 AC116351.2-201ENST00000606540 1585 ntBASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.04■□□□□ 0.48
CNTNAP3Q9BZ76 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CNTNAP3Q9BZ76 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 TFP1-202ENST00000475455 1573 ntBASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 RNF126P1-202ENST00000569893 925 ntBASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 FAM197Y3-203ENST00000618346 717 ntBASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CNTNAP3Q9BZ76 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.02■□□□□ 0.47
CNTNAP3Q9BZ76 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNTNAP3Q9BZ76 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
CNTNAP3Q9BZ76 AC233702.3-201ENST00000578656 1387 ntBASIC18.02■□□□□ 0.47
CNTNAP3Q9BZ76 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNTNAP3Q9BZ76 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNTNAP3Q9BZ76 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms