Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 KRT16P4-201ENST00000453883 522 ntBASIC15.95■□□□□ 0.14
FOXC2Q99958 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXC2Q99958 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXC2Q99958 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXC2Q99958 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.95■□□□□ 0.14
FOXC2Q99958 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.95■□□□□ 0.14
FOXC2Q99958 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXC2Q99958 AF228730.7-201ENST00000641842 219 ntBASIC15.95■□□□□ 0.14
FOXC2Q99958 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXC2Q99958 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXC2Q99958 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXC2Q99958 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
FOXC2Q99958 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXC2Q99958 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXC2Q99958 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
FOXC2Q99958 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
FOXC2Q99958 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXC2Q99958 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
FOXC2Q99958 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
FOXC2Q99958 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.94■□□□□ 0.14
FOXC2Q99958 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.94■□□□□ 0.14
FOXC2Q99958 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.94■□□□□ 0.14
FOXC2Q99958 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
FOXC2Q99958 AC092183.1-201ENST00000469884 875 ntBASIC15.94■□□□□ 0.14
FOXC2Q99958 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.94■□□□□ 0.14
FOXC2Q99958 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.94■□□□□ 0.14
FOXC2Q99958 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
FOXC2Q99958 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
FOXC2Q99958 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
FOXC2Q99958 AL136038.4-201ENST00000603606 1261 ntBASIC15.94■□□□□ 0.14
FOXC2Q99958 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.94■□□□□ 0.14
FOXC2Q99958 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
FOXC2Q99958 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXC2Q99958 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
FOXC2Q99958 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
FOXC2Q99958 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXC2Q99958 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
FOXC2Q99958 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
FOXC2Q99958 FAM220CP-201ENST00000395253 831 ntBASIC15.93■□□□□ 0.14
FOXC2Q99958 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.93■□□□□ 0.14
FOXC2Q99958 MIR1233-2-201ENST00000408138 82 ntBASIC15.93■□□□□ 0.14
FOXC2Q99958 MIR1233-1-201ENST00000408722 82 ntBASIC15.93■□□□□ 0.14
FOXC2Q99958 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
FOXC2Q99958 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
FOXC2Q99958 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXC2Q99958 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.93■□□□□ 0.14
FOXC2Q99958 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.93■□□□□ 0.14
FOXC2Q99958 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.93■□□□□ 0.14
FOXC2Q99958 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.93■□□□□ 0.14
FOXC2Q99958 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXC2Q99958 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.93■□□□□ 0.14
FOXC2Q99958 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXC2Q99958 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
FOXC2Q99958 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
FOXC2Q99958 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
FOXC2Q99958 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
FOXC2Q99958 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXC2Q99958 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.92■□□□□ 0.14
FOXC2Q99958 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
FOXC2Q99958 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXC2Q99958 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
FOXC2Q99958 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
FOXC2Q99958 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
FOXC2Q99958 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FOXC2Q99958 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXC2Q99958 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.92■□□□□ 0.14
FOXC2Q99958 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.92■□□□□ 0.14
FOXC2Q99958 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.92■□□□□ 0.14
FOXC2Q99958 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.92■□□□□ 0.14
FOXC2Q99958 AC090616.6-201ENST00000582640 721 ntBASIC15.92■□□□□ 0.14
FOXC2Q99958 AC079602.3-201ENST00000623931 403 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms