Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.63□□□□□ -0.39
LITAFQ99732 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC12.63□□□□□ -0.39
LITAFQ99732 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC12.63□□□□□ -0.39
LITAFQ99732 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
LITAFQ99732 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 AL591742.1-201ENST00000604433 565 ntBASIC12.63□□□□□ -0.39
LITAFQ99732 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.63□□□□□ -0.39
LITAFQ99732 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.63□□□□□ -0.39
LITAFQ99732 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.63□□□□□ -0.39
LITAFQ99732 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.63□□□□□ -0.39
LITAFQ99732 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LITAFQ99732 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC12.62□□□□□ -0.39
LITAFQ99732 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.62□□□□□ -0.39
LITAFQ99732 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
LITAFQ99732 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LITAFQ99732 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 AC093677.2-201ENST00000600169 1863 ntBASIC12.62□□□□□ -0.39
LITAFQ99732 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC12.62□□□□□ -0.39
LITAFQ99732 RASA4CP-201ENST00000424092 1398 ntBASIC12.62□□□□□ -0.39
LITAFQ99732 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC12.62□□□□□ -0.39
LITAFQ99732 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LITAFQ99732 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC12.62□□□□□ -0.39
LITAFQ99732 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC12.62□□□□□ -0.39
LITAFQ99732 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC12.62□□□□□ -0.39
LITAFQ99732 GRAMD4P4-201ENST00000613563 1115 ntBASIC12.62□□□□□ -0.39
LITAFQ99732 MIR6084-201ENST00000622012 110 ntBASIC12.62□□□□□ -0.39
LITAFQ99732 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.62□□□□□ -0.39
LITAFQ99732 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.62□□□□□ -0.39
LITAFQ99732 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC12.62□□□□□ -0.39
LITAFQ99732 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.62□□□□□ -0.39
LITAFQ99732 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LITAFQ99732 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.61□□□□□ -0.39
LITAFQ99732 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LITAFQ99732 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LITAFQ99732 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.61□□□□□ -0.39
LITAFQ99732 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LITAFQ99732 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 PP12613-201ENST00000424958 2230 ntBASIC12.61□□□□□ -0.39
LITAFQ99732 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
LITAFQ99732 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.61□□□□□ -0.39
LITAFQ99732 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.61□□□□□ -0.39
LITAFQ99732 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LITAFQ99732 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LITAFQ99732 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LITAFQ99732 MCRIP2P1-201ENST00000394346 511 ntBASIC12.61□□□□□ -0.39
LITAFQ99732 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC12.61□□□□□ -0.39
LITAFQ99732 AL136116.3-201ENST00000402907 1138 ntBASIC12.61□□□□□ -0.39
LITAFQ99732 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
LITAFQ99732 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC12.61□□□□□ -0.39
LITAFQ99732 AL035685.1-201ENST00000636663 812 ntBASIC12.61□□□□□ -0.39
LITAFQ99732 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.61□□□□□ -0.39
LITAFQ99732 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.61□□□□□ -0.39
LITAFQ99732 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC12.61□□□□□ -0.39
LITAFQ99732 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.61□□□□□ -0.39
LITAFQ99732 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
LITAFQ99732 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
LITAFQ99732 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LITAFQ99732 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LITAFQ99732 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms