Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 AC120498.8-201ENST00000614275 531 ntBASIC18.4■□□□□ 0.54
PRPF18Q99633 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.4■□□□□ 0.54
PRPF18Q99633 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.4■□□□□ 0.54
PRPF18Q99633 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PRPF18Q99633 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.39■□□□□ 0.53
PRPF18Q99633 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PRPF18Q99633 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.39■□□□□ 0.53
PRPF18Q99633 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PRPF18Q99633 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.39■□□□□ 0.53
PRPF18Q99633 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.39■□□□□ 0.53
PRPF18Q99633 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.39■□□□□ 0.53
PRPF18Q99633 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.39■□□□□ 0.53
PRPF18Q99633 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.39■□□□□ 0.53
PRPF18Q99633 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.39■□□□□ 0.53
PRPF18Q99633 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.39■□□□□ 0.53
PRPF18Q99633 AL121829.2-201ENST00000620908 328 ntBASIC18.39■□□□□ 0.53
PRPF18Q99633 AC133041.1-202ENST00000642053 222 ntBASIC18.39■□□□□ 0.53
PRPF18Q99633 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.39■□□□□ 0.53
PRPF18Q99633 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
PRPF18Q99633 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.39■□□□□ 0.53
PRPF18Q99633 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRPF18Q99633 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.39■□□□□ 0.53
PRPF18Q99633 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.38■□□□□ 0.53
PRPF18Q99633 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.38■□□□□ 0.53
PRPF18Q99633 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.38■□□□□ 0.53
PRPF18Q99633 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
PRPF18Q99633 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.38■□□□□ 0.53
PRPF18Q99633 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PRPF18Q99633 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.38■□□□□ 0.53
PRPF18Q99633 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.38■□□□□ 0.53
PRPF18Q99633 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.38■□□□□ 0.53
PRPF18Q99633 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.38■□□□□ 0.53
PRPF18Q99633 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
PRPF18Q99633 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.38■□□□□ 0.53
PRPF18Q99633 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.38■□□□□ 0.53
PRPF18Q99633 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.38■□□□□ 0.53
PRPF18Q99633 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.38■□□□□ 0.53
PRPF18Q99633 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PRPF18Q99633 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 AC012313.1-201ENST00000593393 3059 ntBASIC18.38■□□□□ 0.53
PRPF18Q99633 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPF18Q99633 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PRPF18Q99633 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 NOC2LP2-201ENST00000407594 1944 ntBASIC18.37■□□□□ 0.53
PRPF18Q99633 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 AC068880.1-201ENST00000507289 2297 ntBASIC18.37■□□□□ 0.53
PRPF18Q99633 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.37■□□□□ 0.53
PRPF18Q99633 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRPF18Q99633 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRPF18Q99633 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPF18Q99633 TUBB8P6-201ENST00000436895 1288 ntBASIC18.37■□□□□ 0.53
PRPF18Q99633 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPF18Q99633 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.37■□□□□ 0.53
PRPF18Q99633 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPF18Q99633 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRPF18Q99633 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms