Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 AC105233.4-201ENST00000642045 216 ntBASIC17.87■□□□□ 0.45
NR1H4Q96RI1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 KRT8P17-201ENST00000453110 1448 ntBASIC17.87■□□□□ 0.45
NR1H4Q96RI1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NR1H4Q96RI1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 AC135776.1-201ENST00000319817 2481 ntBASIC17.86■□□□□ 0.45
NR1H4Q96RI1 AC018695.7-201ENST00000624587 2492 ntBASIC17.86■□□□□ 0.45
NR1H4Q96RI1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 AC108860.2-201ENST00000562760 2183 ntBASIC17.86■□□□□ 0.45
NR1H4Q96RI1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NR1H4Q96RI1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 AL118508.1-201ENST00000613502 2345 ntBASIC17.85■□□□□ 0.45
NR1H4Q96RI1 AL391005.1-201ENST00000623953 2435 ntBASIC17.85■□□□□ 0.45
NR1H4Q96RI1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NR1H4Q96RI1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 KRT16P2-201ENST00000414673 1423 ntBASIC17.84■□□□□ 0.45
NR1H4Q96RI1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 AC027682.1-201ENST00000562846 899 ntBASIC17.84■□□□□ 0.45
NR1H4Q96RI1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 AC106739.1-201ENST00000617035 715 ntBASIC17.84■□□□□ 0.45
NR1H4Q96RI1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NR1H4Q96RI1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms