Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC22.21■■□□□ 1.15
CDCA5Q96FF9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDCA5Q96FF9 AL512408.1-201ENST00000569378 2000 ntBASIC22.21■■□□□ 1.15
CDCA5Q96FF9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDCA5Q96FF9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
CDCA5Q96FF9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
CDCA5Q96FF9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 AF238378.1-201ENST00000526806 358 ntBASIC22.2■■□□□ 1.14
CDCA5Q96FF9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 REXO1L6P-202ENST00000619970 1078 ntBASIC22.2■■□□□ 1.14
CDCA5Q96FF9 TP73-AS1-207ENST00000624167 988 ntBASIC22.2■■□□□ 1.14
CDCA5Q96FF9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.2■■□□□ 1.14
CDCA5Q96FF9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 KRT18P23-201ENST00000435622 1283 ntBASIC22.19■■□□□ 1.14
CDCA5Q96FF9 SLC25A1P1-201ENST00000528351 927 ntBASIC22.19■■□□□ 1.14
CDCA5Q96FF9 AP001005.1-201ENST00000571755 1248 ntBASIC22.19■■□□□ 1.14
CDCA5Q96FF9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CDCA5Q96FF9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDCA5Q96FF9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 MOK-208ENST00000519058 917 ntTSL 2 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 AC104390.1-201ENST00000555663 520 ntBASIC22.17■■□□□ 1.14
CDCA5Q96FF9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC22.17■■□□□ 1.14
CDCA5Q96FF9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDCA5Q96FF9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 AC064862.7-201ENST00000604520 867 ntBASIC22.16■■□□□ 1.14
CDCA5Q96FF9 AL592071.1-201ENST00000611956 408 ntBASIC22.16■■□□□ 1.14
CDCA5Q96FF9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 AL391422.3-201ENST00000603791 2761 ntBASIC22.16■■□□□ 1.14
CDCA5Q96FF9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CDCA5Q96FF9 AC073314.1-201ENST00000568729 2216 ntBASIC22.16■■□□□ 1.14
CDCA5Q96FF9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms