Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 KRT18P23-201ENST00000435622 1283 ntBASIC19.62■□□□□ 0.73
HLA-CQ95604 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-CQ95604 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
HLA-CQ95604 AC018712.1-201ENST00000455767 687 ntBASIC19.62■□□□□ 0.73
HLA-CQ95604 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-CQ95604 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-CQ95604 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-CQ95604 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.62■□□□□ 0.73
HLA-CQ95604 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.62■□□□□ 0.73
HLA-CQ95604 MIR7706-201ENST00000613747 67 ntBASIC19.62■□□□□ 0.73
HLA-CQ95604 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.62■□□□□ 0.73
HLA-CQ95604 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-CQ95604 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-CQ95604 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-CQ95604 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-CQ95604 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-CQ95604 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-CQ95604 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-CQ95604 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.62■□□□□ 0.73
HLA-CQ95604 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HLA-CQ95604 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.61■□□□□ 0.73
HLA-CQ95604 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-CQ95604 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-CQ95604 RPS8P6-201ENST00000426177 609 ntBASIC19.61■□□□□ 0.73
HLA-CQ95604 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-CQ95604 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 AC008608.2-201ENST00000606089 416 ntBASIC19.61■□□□□ 0.73
HLA-CQ95604 AC010240.3-201ENST00000607688 395 ntBASIC19.61■□□□□ 0.73
HLA-CQ95604 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-CQ95604 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-CQ95604 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HLA-CQ95604 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-CQ95604 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.6■□□□□ 0.73
HLA-CQ95604 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-CQ95604 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-CQ95604 IGHGP-201ENST00000390555 1178 ntBASIC19.6■□□□□ 0.73
HLA-CQ95604 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.6■□□□□ 0.73
HLA-CQ95604 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-CQ95604 MIR5100-201ENST00000579544 119 ntBASIC19.6■□□□□ 0.73
HLA-CQ95604 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-CQ95604 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.6■□□□□ 0.73
HLA-CQ95604 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-CQ95604 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-CQ95604 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-CQ95604 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-CQ95604 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
HLA-CQ95604 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-CQ95604 KRT8P7-201ENST00000533003 1432 ntBASIC19.59■□□□□ 0.73
HLA-CQ95604 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HLA-CQ95604 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-CQ95604 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-CQ95604 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-CQ95604 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
HLA-CQ95604 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-CQ95604 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-CQ95604 RPS2P28-201ENST00000314255 741 ntBASIC19.59■□□□□ 0.73
HLA-CQ95604 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-CQ95604 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-CQ95604 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-CQ95604 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-CQ95604 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-CQ95604 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-CQ95604 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-CQ95604 AC104390.1-201ENST00000555663 520 ntBASIC19.59■□□□□ 0.73
HLA-CQ95604 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-CQ95604 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-CQ95604 AC011840.4-201ENST00000578471 627 ntBASIC19.59■□□□□ 0.73
HLA-CQ95604 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-CQ95604 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-CQ95604 AC010327.4-202ENST00000591484 748 ntBASIC19.59■□□□□ 0.73
HLA-CQ95604 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-CQ95604 AC027601.4-201ENST00000611259 610 ntBASIC19.59■□□□□ 0.73
HLA-CQ95604 FAM215A-202ENST00000632077 792 ntBASIC19.59■□□□□ 0.73
HLA-CQ95604 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-CQ95604 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HLA-CQ95604 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-CQ95604 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
HLA-CQ95604 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-CQ95604 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-CQ95604 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.58■□□□□ 0.73
HLA-CQ95604 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-CQ95604 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-CQ95604 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-CQ95604 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.58■□□□□ 0.72
HLA-CQ95604 RPSAP43-201ENST00000402237 625 ntBASIC19.58■□□□□ 0.72
HLA-CQ95604 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.58■□□□□ 0.72
HLA-CQ95604 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms