Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB3Q92617 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB3Q92617 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB3Q92617 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB3Q92617 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB3Q92617 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB3Q92617 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB3Q92617 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB3Q92617 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB3Q92617 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPB3Q92617 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPB3Q92617 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.97□□□□□ -0.01
NPIPB3Q92617 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 AC083880.1-201ENST00000608266 535 ntBASIC14.97□□□□□ -0.01
NPIPB3Q92617 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPB3Q92617 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPB3Q92617 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 OR6D1P-202ENST00000641007 5290 ntBASIC14.96□□□□□ -0.01
NPIPB3Q92617 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 AC098934.4-201ENST00000564127 592 ntBASIC14.96□□□□□ -0.01
NPIPB3Q92617 AL138781.1-201ENST00000566567 1274 ntBASIC14.96□□□□□ -0.01
NPIPB3Q92617 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
NPIPB3Q92617 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPB3Q92617 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPB3Q92617 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
NPIPB3Q92617 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPB3Q92617 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.96□□□□□ -0.02
NPIPB3Q92617 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.96□□□□□ -0.02
NPIPB3Q92617 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NPIPB3Q92617 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
NPIPB3Q92617 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB3Q92617 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB3Q92617 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.95□□□□□ -0.02
NPIPB3Q92617 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB3Q92617 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NPIPB3Q92617 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB3Q92617 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB3Q92617 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB3Q92617 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NPIPB3Q92617 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms