Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 AL391807.1-203ENST00000604392 2365 ntBASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 AC111152.3-201ENST00000569699 673 ntBASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
RAPGEF4Q8WZA2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 MIR662-201ENST00000384847 95 ntBASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RAPGEF4Q8WZA2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 CHCHD2P8-201ENST00000429873 447 ntBASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 AC246785.2-201ENST00000432512 513 ntBASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RAPGEF4Q8WZA2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
RAPGEF4Q8WZA2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
RAPGEF4Q8WZA2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
RAPGEF4Q8WZA2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 Z82202.1-201ENST00000623446 1880 ntBASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
RAPGEF4Q8WZA2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 TSPY22P-201ENST00000427496 604 ntBASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 AL109659.2-201ENST00000606809 1674 ntBASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RAPGEF4Q8WZA2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms