Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 KRT18P6-201ENST00000555540 1265 ntBASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN4IP1Q8WWV3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RTN4IP1Q8WWV3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
RTN4IP1Q8WWV3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
RTN4IP1Q8WWV3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
RTN4IP1Q8WWV3 IRX1P1-201ENST00000438849 1838 ntBASIC15.96■□□□□ 0.14
RTN4IP1Q8WWV3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.96■□□□□ 0.14
RTN4IP1Q8WWV3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RTN4IP1Q8WWV3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.96■□□□□ 0.14
RTN4IP1Q8WWV3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.96■□□□□ 0.14
RTN4IP1Q8WWV3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 BICD1-207ENST00000551848 1962 ntBASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 AL512353.2-201ENST00000448759 1962 ntBASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 AL133373.2-201ENST00000623187 2828 ntBASIC15.95■□□□□ 0.14
RTN4IP1Q8WWV3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RTN4IP1Q8WWV3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms