Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 KRT8P9-201ENST00000558927 1449 ntBASIC19.21■□□□□ 0.67
PTCD2Q8WV60 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.21■□□□□ 0.67
PTCD2Q8WV60 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PTCD2Q8WV60 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 AC087499.1-201ENST00000418141 1075 ntBASIC19.2■□□□□ 0.66
PTCD2Q8WV60 TSPY23P-201ENST00000440136 739 ntBASIC19.2■□□□□ 0.66
PTCD2Q8WV60 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.2■□□□□ 0.66
PTCD2Q8WV60 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 AP000525.1-201ENST00000608286 694 ntBASIC19.2■□□□□ 0.66
PTCD2Q8WV60 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 KRT8P41-201ENST00000533985 1514 ntBASIC19.2■□□□□ 0.66
PTCD2Q8WV60 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PTCD2Q8WV60 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 AL390955.1-201ENST00000428694 934 ntBASIC19.19■□□□□ 0.66
PTCD2Q8WV60 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 AC011506.1-201ENST00000474329 610 ntBASIC19.19■□□□□ 0.66
PTCD2Q8WV60 Z85996.1-201ENST00000494644 937 ntBASIC19.19■□□□□ 0.66
PTCD2Q8WV60 AC116562.2-201ENST00000507042 360 ntBASIC19.19■□□□□ 0.66
PTCD2Q8WV60 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PTCD2Q8WV60 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.18■□□□□ 0.66
PTCD2Q8WV60 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.18■□□□□ 0.66
PTCD2Q8WV60 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms