Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHD6Q8TD26 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHD6Q8TD26 MRPL20P1-201ENST00000400819 433 ntBASIC17.09■□□□□ 0.33
CHD6Q8TD26 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.09■□□□□ 0.33
CHD6Q8TD26 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.09■□□□□ 0.33
CHD6Q8TD26 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHD6Q8TD26 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHD6Q8TD26 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD6Q8TD26 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.09■□□□□ 0.33
CHD6Q8TD26 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.09■□□□□ 0.33
CHD6Q8TD26 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD6Q8TD26 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHD6Q8TD26 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.09■□□□□ 0.33
CHD6Q8TD26 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.09■□□□□ 0.33
CHD6Q8TD26 AC069262.1-201ENST00000539058 672 ntBASIC17.09■□□□□ 0.33
CHD6Q8TD26 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHD6Q8TD26 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHD6Q8TD26 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHD6Q8TD26 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHD6Q8TD26 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHD6Q8TD26 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHD6Q8TD26 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHD6Q8TD26 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.08■□□□□ 0.33
CHD6Q8TD26 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.08■□□□□ 0.33
CHD6Q8TD26 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.08■□□□□ 0.33
CHD6Q8TD26 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.08■□□□□ 0.33
CHD6Q8TD26 AC073592.5-201ENST00000624854 528 ntBASIC17.08■□□□□ 0.33
CHD6Q8TD26 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHD6Q8TD26 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHD6Q8TD26 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHD6Q8TD26 AC080038.3-201ENST00000623346 1952 ntBASIC17.08■□□□□ 0.32
CHD6Q8TD26 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHD6Q8TD26 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHD6Q8TD26 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHD6Q8TD26 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.08■□□□□ 0.32
CHD6Q8TD26 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHD6Q8TD26 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD6Q8TD26 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 AL121603.2-201ENST00000557373 2117 ntBASIC17.07■□□□□ 0.32
CHD6Q8TD26 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD6Q8TD26 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 IGHGP-201ENST00000390555 1178 ntBASIC17.07■□□□□ 0.32
CHD6Q8TD26 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 RNA5SP421-201ENST00000516864 134 ntBASIC17.07■□□□□ 0.32
CHD6Q8TD26 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 AC021087.4-201ENST00000563761 564 ntBASIC17.07■□□□□ 0.32
CHD6Q8TD26 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.07■□□□□ 0.32
CHD6Q8TD26 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD6Q8TD26 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD6Q8TD26 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD6Q8TD26 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.07■□□□□ 0.32
CHD6Q8TD26 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD6Q8TD26 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD6Q8TD26 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD6Q8TD26 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHD6Q8TD26 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD6Q8TD26 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD6Q8TD26 RN7SL606P-201ENST00000472779 293 ntBASIC17.06■□□□□ 0.32
CHD6Q8TD26 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 MTDHP3-201ENST00000594186 672 ntBASIC17.06■□□□□ 0.32
CHD6Q8TD26 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHD6Q8TD26 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD6Q8TD26 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD6Q8TD26 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD6Q8TD26 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHD6Q8TD26 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHD6Q8TD26 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHD6Q8TD26 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD6Q8TD26 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHD6Q8TD26 MKNK2P1-201ENST00000437526 628 ntBASIC17.06■□□□□ 0.32
CHD6Q8TD26 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms