Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC140113.2-201ENST00000604370 208 ntBASIC25.36■■□□□ 1.65
COL22A1Q8NFW1 AC124864.1-201ENST00000623408 392 ntBASIC25.36■■□□□ 1.65
COL22A1Q8NFW1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
COL22A1Q8NFW1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL22A1Q8NFW1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
COL22A1Q8NFW1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 AC010327.4-202ENST00000591484 748 ntBASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 IGHV3-41-201ENST00000613121 348 ntBASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.35■■□□□ 1.65
COL22A1Q8NFW1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 AL139424.1-201ENST00000607572 797 ntBASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 RPL13AP23-201ENST00000480739 586 ntBASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 IGHV3-22-201ENST00000520721 359 ntBASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL22A1Q8NFW1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 AC098831.1-202ENST00000438821 336 ntBASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 GUSBP12-201ENST00000513727 720 ntBASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 LINC02084-201ENST00000606069 1096 ntBASIC25.33■■□□□ 1.65
COL22A1Q8NFW1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
COL22A1Q8NFW1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
COL22A1Q8NFW1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC25.32■■□□□ 1.64
COL22A1Q8NFW1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
COL22A1Q8NFW1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL22A1Q8NFW1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC25.32■■□□□ 1.64
COL22A1Q8NFW1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL22A1Q8NFW1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC25.32■■□□□ 1.64
COL22A1Q8NFW1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL22A1Q8NFW1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
COL22A1Q8NFW1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
COL22A1Q8NFW1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC25.31■■□□□ 1.64
COL22A1Q8NFW1 KRT89P-201ENST00000620027 1478 ntBASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 AC093909.1-201ENST00000504731 1122 ntBASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
COL22A1Q8NFW1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms