Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 RPS2P52-201ENST00000469610 820 ntBASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIML2Q8N7C3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 AP006587.1-201ENST00000534129 1502 ntBASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 AC097658.1-201ENST00000475555 843 ntBASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 HLA-B-256ENST00000639848 1089 ntBASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 AC141586.3-201ENST00000562166 1838 ntBASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 AC092368.3-202ENST00000574180 1591 ntBASIC18.3■□□□□ 0.52
TRIML2Q8N7C3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 YBX1P10-201ENST00000444752 975 ntBASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIML2Q8N7C3 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.28■□□□□ 0.52
TRIML2Q8N7C3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIML2Q8N7C3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIML2Q8N7C3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.28■□□□□ 0.52
TRIML2Q8N7C3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIML2Q8N7C3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms