Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NME8Q8N427 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
NME8Q8N427 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.88■□□□□ 0.93
NME8Q8N427 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NME8Q8N427 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.88■□□□□ 0.93
NME8Q8N427 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NME8Q8N427 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME8Q8N427 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME8Q8N427 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NME8Q8N427 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NME8Q8N427 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME8Q8N427 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.87■□□□□ 0.93
NME8Q8N427 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.87■□□□□ 0.93
NME8Q8N427 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.87■□□□□ 0.93
NME8Q8N427 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NME8Q8N427 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.87■□□□□ 0.93
NME8Q8N427 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NME8Q8N427 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NME8Q8N427 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
NME8Q8N427 KRT8P3-201ENST00000519669 1449 ntBASIC20.87■□□□□ 0.93
NME8Q8N427 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
NME8Q8N427 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.86■□□□□ 0.93
NME8Q8N427 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.86■□□□□ 0.93
NME8Q8N427 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.86■□□□□ 0.93
NME8Q8N427 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.86■□□□□ 0.93
NME8Q8N427 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.86■□□□□ 0.93
NME8Q8N427 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.86■□□□□ 0.93
NME8Q8N427 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.86■□□□□ 0.93
NME8Q8N427 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.86■□□□□ 0.93
NME8Q8N427 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NME8Q8N427 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.86■□□□□ 0.93
NME8Q8N427 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NME8Q8N427 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NME8Q8N427 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NME8Q8N427 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.85■□□□□ 0.93
NME8Q8N427 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NME8Q8N427 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.85■□□□□ 0.93
NME8Q8N427 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NME8Q8N427 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NME8Q8N427 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.85■□□□□ 0.93
NME8Q8N427 AC112907.2-201ENST00000448639 330 ntBASIC20.85■□□□□ 0.93
NME8Q8N427 AL136038.3-201ENST00000561909 1096 ntBASIC20.85■□□□□ 0.93
NME8Q8N427 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.85■□□□□ 0.93
NME8Q8N427 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NME8Q8N427 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.85■□□□□ 0.93
NME8Q8N427 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NME8Q8N427 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NME8Q8N427 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NME8Q8N427 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.85■□□□□ 0.93
NME8Q8N427 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.85■□□□□ 0.93
NME8Q8N427 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.85■□□□□ 0.93
NME8Q8N427 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.85■□□□□ 0.93
NME8Q8N427 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NME8Q8N427 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.85■□□□□ 0.93
NME8Q8N427 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NME8Q8N427 IER3-202ENST00000376377 1350 ntBASIC20.85■□□□□ 0.93
NME8Q8N427 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NME8Q8N427 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NME8Q8N427 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NME8Q8N427 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NME8Q8N427 GPAT2P1-201ENST00000444924 1672 ntBASIC20.84■□□□□ 0.93
NME8Q8N427 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NME8Q8N427 AL023284.2-201ENST00000405850 579 ntBASIC20.84■□□□□ 0.93
NME8Q8N427 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.84■□□□□ 0.93
NME8Q8N427 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NME8Q8N427 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.84■□□□□ 0.93
NME8Q8N427 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NME8Q8N427 AC116407.4-201ENST00000623319 1061 ntBASIC20.84■□□□□ 0.93
NME8Q8N427 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.84■□□□□ 0.93
NME8Q8N427 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NME8Q8N427 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.84■□□□□ 0.93
NME8Q8N427 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NME8Q8N427 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NME8Q8N427 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NME8Q8N427 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NME8Q8N427 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NME8Q8N427 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NME8Q8N427 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NME8Q8N427 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NME8Q8N427 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NME8Q8N427 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NME8Q8N427 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NME8Q8N427 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.83■□□□□ 0.93
NME8Q8N427 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NME8Q8N427 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.83■□□□□ 0.93
NME8Q8N427 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
NME8Q8N427 HYMAI.1-201ENST00000620949 238 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms