Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
SIX5Q8N196 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.4■□□□□ 0.7
SIX5Q8N196 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
SIX5Q8N196 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIX5Q8N196 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.39■□□□□ 0.7
SIX5Q8N196 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 AP002469.2-201ENST00000531724 424 ntBASIC19.39■□□□□ 0.69
SIX5Q8N196 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 TPSP2-201ENST00000561760 610 ntBASIC19.39■□□□□ 0.69
SIX5Q8N196 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.39■□□□□ 0.69
SIX5Q8N196 SLC25A6P4-201ENST00000586535 553 ntBASIC19.39■□□□□ 0.69
SIX5Q8N196 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
SIX5Q8N196 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.39■□□□□ 0.69
SIX5Q8N196 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.39■□□□□ 0.69
SIX5Q8N196 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.39■□□□□ 0.69
SIX5Q8N196 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SIX5Q8N196 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.39■□□□□ 0.69
SIX5Q8N196 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.39■□□□□ 0.69
SIX5Q8N196 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.39■□□□□ 0.69
SIX5Q8N196 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIX5Q8N196 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.39■□□□□ 0.69
SIX5Q8N196 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SIX5Q8N196 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIX5Q8N196 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SIX5Q8N196 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIX5Q8N196 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX5Q8N196 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.38■□□□□ 0.69
SIX5Q8N196 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SIX5Q8N196 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.38■□□□□ 0.69
SIX5Q8N196 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX5Q8N196 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIX5Q8N196 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.38■□□□□ 0.69
SIX5Q8N196 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX5Q8N196 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX5Q8N196 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.38■□□□□ 0.69
SIX5Q8N196 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SIX5Q8N196 KRT18P31-201ENST00000506277 1292 ntBASIC19.38■□□□□ 0.69
SIX5Q8N196 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
SIX5Q8N196 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIX5Q8N196 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.38■□□□□ 0.69
SIX5Q8N196 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.38■□□□□ 0.69
SIX5Q8N196 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.38■□□□□ 0.69
SIX5Q8N196 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SIX5Q8N196 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SIX5Q8N196 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.38■□□□□ 0.69
SIX5Q8N196 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
SIX5Q8N196 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIX5Q8N196 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SIX5Q8N196 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.38■□□□□ 0.69
SIX5Q8N196 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.38■□□□□ 0.69
SIX5Q8N196 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX5Q8N196 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX5Q8N196 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX5Q8N196 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.37■□□□□ 0.69
SIX5Q8N196 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX5Q8N196 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX5Q8N196 DRAXINP1-201ENST00000437611 948 ntBASIC19.37■□□□□ 0.69
SIX5Q8N196 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.37■□□□□ 0.69
SIX5Q8N196 AC106795.1-205ENST00000512851 1056 ntBASIC19.37■□□□□ 0.69
SIX5Q8N196 AL662844.1-201ENST00000546340 181 ntBASIC19.37■□□□□ 0.69
SIX5Q8N196 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SIX5Q8N196 AC079602.3-201ENST00000623931 403 ntBASIC19.37■□□□□ 0.69
SIX5Q8N196 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX5Q8N196 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIX5Q8N196 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.37■□□□□ 0.69
SIX5Q8N196 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SIX5Q8N196 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SIX5Q8N196 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIX5Q8N196 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SIX5Q8N196 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SIX5Q8N196 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
SIX5Q8N196 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SIX5Q8N196 AC036111.1-201ENST00000533973 1582 ntBASIC19.36■□□□□ 0.69
SIX5Q8N196 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX5Q8N196 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX5Q8N196 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SIX5Q8N196 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX5Q8N196 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX5Q8N196 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX5Q8N196 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX5Q8N196 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.36■□□□□ 0.69
SIX5Q8N196 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.36■□□□□ 0.69
SIX5Q8N196 AC012615.1-201ENST00000565797 1299 ntBASIC19.36■□□□□ 0.69
SIX5Q8N196 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.36■□□□□ 0.69
SIX5Q8N196 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
SIX5Q8N196 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.36■□□□□ 0.69
SIX5Q8N196 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.36■□□□□ 0.69
SIX5Q8N196 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX5Q8N196 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms