Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL27A1Q8IZC6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 AKR1C7P-201ENST00000305623 895 ntBASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 AL390719.2-201ENST00000606993 987 ntBASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 AC233702.3-201ENST00000578656 1387 ntBASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 RCC2P3-201ENST00000418112 1537 ntBASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL27A1Q8IZC6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 LINC00265-3P-201ENST00000447588 903 ntBASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 MRPL3P1-201ENST00000400109 1033 ntBASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 NUS1P1-201ENST00000446295 882 ntBASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.86■□□□□ 0.45
COL27A1Q8IZC6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 AC125437.2-201ENST00000625180 2167 ntBASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 KRT18P23-201ENST00000435622 1283 ntBASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 AL109659.2-201ENST00000606809 1674 ntBASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
COL27A1Q8IZC6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 KRT18P31-201ENST00000506277 1292 ntBASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 AC106795.1-205ENST00000512851 1056 ntBASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 AP002469.2-201ENST00000531724 424 ntBASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 AC008556.1-201ENST00000610908 2040 ntBASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL27A1Q8IZC6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms