Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC146Q8IYE0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC25.13■■□□□ 1.61
CCDC146Q8IYE0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 AC018445.3-201ENST00000624177 1945 ntBASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 AC120498.9-201ENST00000339021 3867 ntBASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC146Q8IYE0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 AC073912.3-201ENST00000624414 853 ntBASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC146Q8IYE0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC146Q8IYE0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
CCDC146Q8IYE0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 NAPSB-206ENST00000562112 1266 ntBASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 MIR4674-201ENST00000582457 87 ntBASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 AC133561.5-201ENST00000635547 218 ntBASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
CCDC146Q8IYE0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC25.08■■□□□ 1.6
CCDC146Q8IYE0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
CCDC146Q8IYE0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
CCDC146Q8IYE0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC25.07■■□□□ 1.6
CCDC146Q8IYE0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms