Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 TSPY17P-201ENST00000450329 467 ntBASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 CA15P1-201ENST00000481698 905 ntBASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRIM48Q8IWZ4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 TERF1P1-201ENST00000311003 1181 ntBASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 MIR1224-201ENST00000408193 85 ntBASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 HMGA1P5-201ENST00000412453 271 ntBASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.59■□□□□ 0.57
TRIM48Q8IWZ4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.58■□□□□ 0.57
TRIM48Q8IWZ4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM48Q8IWZ4 Z82202.1-201ENST00000623446 1880 ntBASIC18.58■□□□□ 0.57
TRIM48Q8IWZ4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM48Q8IWZ4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM48Q8IWZ4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM48Q8IWZ4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM48Q8IWZ4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM48Q8IWZ4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRIM48Q8IWZ4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 INGX-201ENST00000359239 846 ntBASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM48Q8IWZ4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 AC125437.2-201ENST00000625180 2167 ntBASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 FAM87A-204ENST00000613235 858 ntBASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 AC010653.2-201ENST00000623505 997 ntBASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms