Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 AP001271.2-201ENST00000624018 1556 ntBASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 AP005212.1-201ENST00000581547 1997 ntBASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RP1L1Q8IWN7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 SPDYE13P-201ENST00000445314 798 ntBASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 KRT18P31-201ENST00000506277 1292 ntBASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 AC092119.3-201ENST00000612618 583 ntBASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.14■□□□□ 0.34
RP1L1Q8IWN7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 AC092720.2-201ENST00000602388 1665 ntBASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 AC117500.6-201ENST00000624871 588 ntBASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RP1L1Q8IWN7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 AC011498.5-201ENST00000592027 486 ntBASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 AC092329.2-201ENST00000598402 547 ntBASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 AL162741.1-201ENST00000565563 1558 ntBASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 AL512408.1-201ENST00000569378 2000 ntBASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
RP1L1Q8IWN7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 BX276092.5-203ENST00000456199 560 ntBASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 SLC25A6P4-201ENST00000586535 553 ntBASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms