Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 AC004908.3-201ENST00000610248 625 ntBASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRDL2Q6WN34 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 KRT18P3-201ENST00000451602 1288 ntBASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRDL2Q6WN34 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 MTND1P31-201ENST00000449206 961 ntBASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 AC091607.1-201ENST00000490318 1060 ntBASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 COA4-204ENST00000541455 1038 ntTSL 5 BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 AC040169.1-201ENST00000565382 521 ntBASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 AL596442.2-201ENST00000610240 980 ntBASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CHRDL2Q6WN34 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHRDL2Q6WN34 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CHRDL2Q6WN34 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRDL2Q6WN34 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.5■□□□□ 0.87
CHRDL2Q6WN34 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHRDL2Q6WN34 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRDL2Q6WN34 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRDL2Q6WN34 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRDL2Q6WN34 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHRDL2Q6WN34 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRDL2Q6WN34 RPS2P28-201ENST00000314255 741 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms