Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 COX20P2-201ENST00000452636 358 ntBASIC18.41■□□□□ 0.54
RIF1Q5UIP0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 CNN2P11-201ENST00000429351 262 ntBASIC18.41■□□□□ 0.54
RIF1Q5UIP0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 AC008608.2-201ENST00000606089 416 ntBASIC18.41■□□□□ 0.54
RIF1Q5UIP0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RIF1Q5UIP0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 HLA-J-201ENST00000462773 1622 ntBASIC18.4■□□□□ 0.54
RIF1Q5UIP0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.4■□□□□ 0.54
RIF1Q5UIP0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RIF1Q5UIP0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RIF1Q5UIP0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RIF1Q5UIP0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RIF1Q5UIP0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
RIF1Q5UIP0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 MINOS1P3-201ENST00000457048 203 ntBASIC18.39■□□□□ 0.53
RIF1Q5UIP0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 MIR770-201ENST00000390219 98 ntBASIC18.39■□□□□ 0.53
RIF1Q5UIP0 IGHGP-201ENST00000390555 1178 ntBASIC18.39■□□□□ 0.53
RIF1Q5UIP0 AC132008.2-207ENST00000454517 770 ntBASIC18.39■□□□□ 0.53
RIF1Q5UIP0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.39■□□□□ 0.53
RIF1Q5UIP0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 MTDHP5-201ENST00000598980 586 ntBASIC18.38■□□□□ 0.53
RIF1Q5UIP0 AL096865.1-201ENST00000606796 927 ntBASIC18.38■□□□□ 0.53
RIF1Q5UIP0 AC124864.1-201ENST00000623408 392 ntBASIC18.38■□□□□ 0.53
RIF1Q5UIP0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 AL645939.2-201ENST00000427340 991 ntBASIC18.38■□□□□ 0.53
RIF1Q5UIP0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.38■□□□□ 0.53
RIF1Q5UIP0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms