Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NSUN5P1-202ENST00000421140 1535 ntBASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 NSUN5P2-203ENST00000457352 1529 ntBASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 AC004967.1-201ENST00000453589 447 ntBASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 MIR7706-201ENST00000613747 67 ntBASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO4Q2I0M5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 AC036111.1-201ENST00000533973 1582 ntBASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RSPO4Q2I0M5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RSPO4Q2I0M5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.33■□□□□ 0.53
RSPO4Q2I0M5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RSPO4Q2I0M5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RSPO4Q2I0M5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RSPO4Q2I0M5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.33■□□□□ 0.53
RSPO4Q2I0M5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RSPO4Q2I0M5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RSPO4Q2I0M5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 AC112482.1-201ENST00000492080 688 ntBASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 MIR3917-201ENST00000580971 93 ntBASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 AC239800.4-201ENST00000603712 296 ntBASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 AC027601.4-201ENST00000611259 610 ntBASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.33■□□□□ 0.52
RSPO4Q2I0M5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO4Q2I0M5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms