Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDK3Q00526 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.66■□□□□ 0.58
CDK3Q00526 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.66■□□□□ 0.58
CDK3Q00526 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDK3Q00526 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.66■□□□□ 0.58
CDK3Q00526 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK3Q00526 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.66■□□□□ 0.58
CDK3Q00526 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.66■□□□□ 0.58
CDK3Q00526 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK3Q00526 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CDK3Q00526 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.66■□□□□ 0.58
CDK3Q00526 CR769767.2-201ENST00000622735 460 ntBASIC18.66■□□□□ 0.58
CDK3Q00526 AL590326.2-201ENST00000625139 305 ntBASIC18.66■□□□□ 0.58
CDK3Q00526 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDK3Q00526 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.66■□□□□ 0.58
CDK3Q00526 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDK3Q00526 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.66■□□□□ 0.58
CDK3Q00526 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDK3Q00526 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDK3Q00526 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDK3Q00526 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDK3Q00526 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK3Q00526 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK3Q00526 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDK3Q00526 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK3Q00526 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 AC009947.2-201ENST00000444014 672 ntBASIC18.65■□□□□ 0.58
CDK3Q00526 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK3Q00526 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK3Q00526 YBX1P2-201ENST00000489612 999 ntBASIC18.65■□□□□ 0.58
CDK3Q00526 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.65■□□□□ 0.58
CDK3Q00526 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.65■□□□□ 0.58
CDK3Q00526 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK3Q00526 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.65■□□□□ 0.58
CDK3Q00526 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
CDK3Q00526 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.65■□□□□ 0.58
CDK3Q00526 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDK3Q00526 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDK3Q00526 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDK3Q00526 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDK3Q00526 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CDK3Q00526 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.64■□□□□ 0.58
CDK3Q00526 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDK3Q00526 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK3Q00526 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK3Q00526 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK3Q00526 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK3Q00526 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.64■□□□□ 0.57
CDK3Q00526 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.64■□□□□ 0.57
CDK3Q00526 MCCD1P1-208ENST00000445732 328 ntBASIC18.64■□□□□ 0.57
CDK3Q00526 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.64■□□□□ 0.57
CDK3Q00526 WWOX-216ENST00000569818 525 ntBASIC18.64■□□□□ 0.57
CDK3Q00526 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK3Q00526 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK3Q00526 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
CDK3Q00526 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CDK3Q00526 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK3Q00526 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CDK3Q00526 AC005332.7-201ENST00000614046 2005 ntBASIC18.64■□□□□ 0.57
CDK3Q00526 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.64■□□□□ 0.57
CDK3Q00526 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CDK3Q00526 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK3Q00526 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK3Q00526 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK3Q00526 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CDK3Q00526 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.63■□□□□ 0.57
CDK3Q00526 RNF152P1-201ENST00000397754 604 ntBASIC18.63■□□□□ 0.57
CDK3Q00526 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms