Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.17■■□□□ 1.3
PDE1AP54750 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDE1AP54750 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE1AP54750 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PDE1AP54750 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.17■■□□□ 1.3
PDE1AP54750 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.17■■□□□ 1.3
PDE1AP54750 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
PDE1AP54750 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE1AP54750 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE1AP54750 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE1AP54750 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PDE1AP54750 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
PDE1AP54750 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE1AP54750 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE1AP54750 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDE1AP54750 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC23.16■■□□□ 1.3
PDE1AP54750 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE1AP54750 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE1AP54750 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.16■■□□□ 1.3
PDE1AP54750 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE1AP54750 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.16■■□□□ 1.3
PDE1AP54750 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDE1AP54750 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.16■■□□□ 1.3
PDE1AP54750 AC120498.9-201ENST00000339021 3867 ntBASIC23.16■■□□□ 1.3
PDE1AP54750 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE1AP54750 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDE1AP54750 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.16■■□□□ 1.3
PDE1AP54750 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDE1AP54750 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.16■■□□□ 1.3
PDE1AP54750 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.16■■□□□ 1.3
PDE1AP54750 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE1AP54750 DGCR10-201ENST00000609839 495 ntBASIC23.16■■□□□ 1.3
PDE1AP54750 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PDE1AP54750 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.16■■□□□ 1.3
PDE1AP54750 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PDE1AP54750 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.16■■□□□ 1.3
PDE1AP54750 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE1AP54750 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE1AP54750 KRT8P32-201ENST00000512863 1461 ntBASIC23.16■■□□□ 1.3
PDE1AP54750 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDE1AP54750 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.16■■□□□ 1.3
PDE1AP54750 HEIH-201ENST00000623091 1652 ntBASIC23.16■■□□□ 1.3
PDE1AP54750 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.15■■□□□ 1.3
PDE1AP54750 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE1AP54750 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE1AP54750 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.15■■□□□ 1.3
PDE1AP54750 TSPY7P-201ENST00000431358 1114 ntBASIC23.15■■□□□ 1.3
PDE1AP54750 AL355355.2-201ENST00000442321 338 ntBASIC23.15■■□□□ 1.3
PDE1AP54750 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE1AP54750 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.15■■□□□ 1.3
PDE1AP54750 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.15■■□□□ 1.3
PDE1AP54750 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE1AP54750 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.15■■□□□ 1.3
PDE1AP54750 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.15■■□□□ 1.3
PDE1AP54750 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PDE1AP54750 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.15■■□□□ 1.3
PDE1AP54750 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.15■■□□□ 1.3
PDE1AP54750 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.15■■□□□ 1.3
PDE1AP54750 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.15■■□□□ 1.3
PDE1AP54750 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE1AP54750 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDE1AP54750 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.15■■□□□ 1.3
PDE1AP54750 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.15■■□□□ 1.3
PDE1AP54750 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.15■■□□□ 1.3
PDE1AP54750 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PDE1AP54750 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDE1AP54750 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDE1AP54750 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.15■■□□□ 1.3
PDE1AP54750 USP49-202ENST00000373010 2446 ntTSL 5 BASIC23.14■■□□□ 1.3
PDE1AP54750 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
PDE1AP54750 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
PDE1AP54750 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDE1AP54750 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.14■■□□□ 1.3
PDE1AP54750 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PDE1AP54750 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
PDE1AP54750 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.14■■□□□ 1.29
PDE1AP54750 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.14■■□□□ 1.29
PDE1AP54750 AP003071.4-201ENST00000562276 1284 ntBASIC23.14■■□□□ 1.29
PDE1AP54750 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.14■■□□□ 1.29
PDE1AP54750 AC068587.9-201ENST00000641814 219 ntBASIC23.14■■□□□ 1.29
PDE1AP54750 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDE1AP54750 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE1AP54750 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDE1AP54750 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PDE1AP54750 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.14■■□□□ 1.29
PDE1AP54750 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDE1AP54750 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.14■■□□□ 1.29
PDE1AP54750 SNAI3-AS1-205ENST00000568633 2096 ntBASIC23.13■■□□□ 1.29
PDE1AP54750 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.13■■□□□ 1.29
PDE1AP54750 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDE1AP54750 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.13■■□□□ 1.29
PDE1AP54750 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDE1AP54750 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PDE1AP54750 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC23.13■■□□□ 1.29
PDE1AP54750 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDE1AP54750 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.13■■□□□ 1.29
PDE1AP54750 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.13■■□□□ 1.29
PDE1AP54750 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.13■■□□□ 1.29
PDE1AP54750 DECR2-212ENST00000627716 352 ntTSL 2 BASIC23.13■■□□□ 1.29
PDE1AP54750 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms