Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC1P51610 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC1P51610 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.54■□□□□ 0.24
HCFC1P51610 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HCFC1P51610 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.53■□□□□ 0.24
HCFC1P51610 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.53■□□□□ 0.24
HCFC1P51610 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 AC079781.3-201ENST00000449110 356 ntBASIC16.53■□□□□ 0.24
HCFC1P51610 EMBP1-201ENST00000458200 901 ntBASIC16.53■□□□□ 0.24
HCFC1P51610 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
HCFC1P51610 AL691432.3-201ENST00000621860 400 ntBASIC16.53■□□□□ 0.24
HCFC1P51610 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.53■□□□□ 0.24
HCFC1P51610 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.53■□□□□ 0.24
HCFC1P51610 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.53■□□□□ 0.24
HCFC1P51610 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.53■□□□□ 0.24
HCFC1P51610 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HCFC1P51610 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 CHCHD2P8-201ENST00000429873 447 ntBASIC16.53■□□□□ 0.24
HCFC1P51610 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.53■□□□□ 0.24
HCFC1P51610 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.53■□□□□ 0.24
HCFC1P51610 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.53■□□□□ 0.24
HCFC1P51610 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HCFC1P51610 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HCFC1P51610 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HCFC1P51610 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC1P51610 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC1P51610 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC1P51610 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.52■□□□□ 0.24
HCFC1P51610 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC1P51610 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC1P51610 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.52■□□□□ 0.24
HCFC1P51610 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC1P51610 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.52■□□□□ 0.24
HCFC1P51610 AC004870.1-201ENST00000315132 882 ntBASIC16.52■□□□□ 0.24
HCFC1P51610 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.52■□□□□ 0.24
HCFC1P51610 KRT17P6-201ENST00000453795 1220 ntBASIC16.52■□□□□ 0.24
HCFC1P51610 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HCFC1P51610 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.52■□□□□ 0.24
HCFC1P51610 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC1P51610 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
HCFC1P51610 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC1P51610 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC1P51610 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC1P51610 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.52■□□□□ 0.23
HCFC1P51610 UNC93B7-201ENST00000509439 705 ntBASIC16.52■□□□□ 0.23
HCFC1P51610 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.52■□□□□ 0.23
HCFC1P51610 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC1P51610 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.52■□□□□ 0.23
HCFC1P51610 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC1P51610 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HCFC1P51610 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.51■□□□□ 0.23
HCFC1P51610 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.51■□□□□ 0.23
HCFC1P51610 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 PVRIG2P-201ENST00000435460 978 ntBASIC16.51■□□□□ 0.23
HCFC1P51610 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.51■□□□□ 0.23
HCFC1P51610 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.51■□□□□ 0.23
HCFC1P51610 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.51■□□□□ 0.23
HCFC1P51610 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HCFC1P51610 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HCFC1P51610 AC023511.2-201ENST00000618803 211 ntBASIC16.51■□□□□ 0.23
HCFC1P51610 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.51■□□□□ 0.23
HCFC1P51610 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HCFC1P51610 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HCFC1P51610 TCF3P1-201ENST00000423021 1937 ntBASIC16.51■□□□□ 0.23
HCFC1P51610 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HCFC1P51610 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.5■□□□□ 0.23
HCFC1P51610 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.5■□□□□ 0.23
HCFC1P51610 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.5■□□□□ 0.23
HCFC1P51610 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.5■□□□□ 0.23
HCFC1P51610 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.5■□□□□ 0.23
HCFC1P51610 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms