Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC1A1P43005 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC1A1P43005 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.86■□□□□ 0.77
SLC1A1P43005 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC1A1P43005 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC1A1P43005 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SLC1A1P43005 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.86■□□□□ 0.77
SLC1A1P43005 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC1A1P43005 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC1A1P43005 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC1A1P43005 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC1A1P43005 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC1A1P43005 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC1A1P43005 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC1A1P43005 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SLC1A1P43005 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC1A1P43005 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC1A1P43005 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC1A1P43005 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SLC1A1P43005 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC1A1P43005 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC1A1P43005 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC1A1P43005 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC1A1P43005 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC1A1P43005 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC1A1P43005 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC1A1P43005 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC1A1P43005 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.85■□□□□ 0.77
SLC1A1P43005 NIFKP9-201ENST00000419265 221 ntBASIC19.85■□□□□ 0.77
SLC1A1P43005 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.85■□□□□ 0.77
SLC1A1P43005 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.85■□□□□ 0.77
SLC1A1P43005 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.85■□□□□ 0.77
SLC1A1P43005 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC1A1P43005 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC1A1P43005 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SLC1A1P43005 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SLC1A1P43005 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC1A1P43005 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC1A1P43005 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
SLC1A1P43005 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC1A1P43005 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC1A1P43005 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 PRSS44-201ENST00000515154 1146 ntBASIC19.84■□□□□ 0.77
SLC1A1P43005 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC1A1P43005 AL353708.3-201ENST00000610272 989 ntBASIC19.84■□□□□ 0.77
SLC1A1P43005 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC1A1P43005 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.84■□□□□ 0.77
SLC1A1P43005 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
SLC1A1P43005 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.84■□□□□ 0.77
SLC1A1P43005 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 HEIH-201ENST00000623091 1652 ntBASIC19.84■□□□□ 0.77
SLC1A1P43005 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC1A1P43005 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC1A1P43005 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC1A1P43005 RCC2P6-201ENST00000526625 1557 ntBASIC19.83■□□□□ 0.77
SLC1A1P43005 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC1A1P43005 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC1A1P43005 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.83■□□□□ 0.77
SLC1A1P43005 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC1A1P43005 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC1A1P43005 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC1A1P43005 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC1A1P43005 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms