Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.35■■□□□ 1.01
HTTP42858 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
HTTP42858 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
HTTP42858 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.35■■□□□ 1.01
HTTP42858 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 AC098831.1-202ENST00000438821 336 ntBASIC21.35■■□□□ 1.01
HTTP42858 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.35■■□□□ 1.01
HTTP42858 AL049840.3-201ENST00000602669 611 ntBASIC21.35■■□□□ 1.01
HTTP42858 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HTTP42858 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
HTTP42858 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.35■■□□□ 1.01
HTTP42858 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HTTP42858 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTTP42858 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTTP42858 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTTP42858 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTTP42858 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.34■■□□□ 1.01
HTTP42858 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HTTP42858 AC009065.1-201ENST00000564055 1225 ntBASIC21.34■■□□□ 1.01
HTTP42858 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.34■■□□□ 1.01
HTTP42858 AL691403.2-201ENST00000618460 490 ntBASIC21.34■■□□□ 1.01
HTTP42858 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTTP42858 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTTP42858 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HTTP42858 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.34■■□□□ 1.01
HTTP42858 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.34■■□□□ 1.01
HTTP42858 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTTP42858 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.34■■□□□ 1.01
HTTP42858 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.34■■□□□ 1.01
HTTP42858 AL592071.1-201ENST00000611956 408 ntBASIC21.34■■□□□ 1.01
HTTP42858 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HTTP42858 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HTTP42858 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.34■■□□□ 1.01
HTTP42858 AL035633.1-201ENST00000406139 838 ntBASIC21.33■■□□□ 1.01
HTTP42858 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HTTP42858 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTTP42858 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTTP42858 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HTTP42858 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HTTP42858 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.33■■□□□ 1.01
HTTP42858 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.33■■□□□ 1.01
HTTP42858 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTTP42858 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTTP42858 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HTTP42858 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HTTP42858 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.33■■□□□ 1.01
HTTP42858 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.33■■□□□ 1
HTTP42858 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
HTTP42858 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.33■■□□□ 1
HTTP42858 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
HTTP42858 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.33■■□□□ 1
HTTP42858 BNIP3P18-201ENST00000593976 575 ntBASIC21.33■■□□□ 1
HTTP42858 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.33■■□□□ 1
HTTP42858 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HTTP42858 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.32■■□□□ 1
HTTP42858 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTTP42858 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTTP42858 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTTP42858 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.32■■□□□ 1
HTTP42858 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.32■■□□□ 1
HTTP42858 AC010327.4-202ENST00000591484 748 ntBASIC21.32■■□□□ 1
HTTP42858 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.32■■□□□ 1
HTTP42858 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.32■■□□□ 1
HTTP42858 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTTP42858 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTTP42858 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTTP42858 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HTTP42858 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.32■■□□□ 1
HTTP42858 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
HTTP42858 LINC01711-201ENST00000598340 967 ntBASIC21.32■■□□□ 1
HTTP42858 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
HTTP42858 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
HTTP42858 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HTTP42858 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HTTP42858 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.31■■□□□ 1
HTTP42858 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.31■■□□□ 1
HTTP42858 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HTTP42858 AC092667.1-201ENST00000434301 2586 ntBASIC21.31■■□□□ 1
HTTP42858 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.31■■□□□ 1
HTTP42858 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.31■■□□□ 1
HTTP42858 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
HTTP42858 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.31■■□□□ 1
HTTP42858 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.31■■□□□ 1
HTTP42858 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.31■■□□□ 1
HTTP42858 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
HTTP42858 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.31■■□□□ 1
HTTP42858 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
HTTP42858 AC092720.2-201ENST00000602388 1665 ntBASIC21.31■■□□□ 1
HTTP42858 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HTTP42858 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.31■■□□□ 1
HTTP42858 GPX1P2-201ENST00000429271 606 ntBASIC21.31■■□□□ 1
HTTP42858 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.31■■□□□ 1
HTTP42858 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.31■■□□□ 1
HTTP42858 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.31■■□□□ 1
HTTP42858 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.3■■□□□ 1
HTTP42858 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.3■■□□□ 1
HTTP42858 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms