Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HNF4AP41235 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HNF4AP41235 RPS2P55-201ENST00000397318 883 ntBASIC18.4■□□□□ 0.54
HNF4AP41235 FAM197Y1-201ENST00000421178 764 ntBASIC18.4■□□□□ 0.54
HNF4AP41235 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.4■□□□□ 0.54
HNF4AP41235 TSPY23P-201ENST00000440136 739 ntBASIC18.4■□□□□ 0.54
HNF4AP41235 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.4■□□□□ 0.54
HNF4AP41235 AC107956.1-201ENST00000494359 873 ntBASIC18.4■□□□□ 0.54
HNF4AP41235 Z85996.1-201ENST00000494644 937 ntBASIC18.4■□□□□ 0.54
HNF4AP41235 AC008550.1-201ENST00000511500 884 ntBASIC18.4■□□□□ 0.54
HNF4AP41235 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.4■□□□□ 0.54
HNF4AP41235 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.4■□□□□ 0.54
HNF4AP41235 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.4■□□□□ 0.54
HNF4AP41235 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.4■□□□□ 0.54
HNF4AP41235 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.4■□□□□ 0.54
HNF4AP41235 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.4■□□□□ 0.54
HNF4AP41235 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.4■□□□□ 0.54
HNF4AP41235 AP006294.2-201ENST00000641667 209 ntBASIC18.4■□□□□ 0.54
HNF4AP41235 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.4■□□□□ 0.54
HNF4AP41235 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HNF4AP41235 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HNF4AP41235 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HNF4AP41235 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HNF4AP41235 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HNF4AP41235 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HNF4AP41235 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HNF4AP41235 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HNF4AP41235 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HNF4AP41235 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HNF4AP41235 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
HNF4AP41235 AC004408.2-201ENST00000623613 2777 ntBASIC18.39■□□□□ 0.53
HNF4AP41235 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.39■□□□□ 0.53
HNF4AP41235 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.39■□□□□ 0.53
HNF4AP41235 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.39■□□□□ 0.53
HNF4AP41235 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.39■□□□□ 0.53
HNF4AP41235 AC073195.1-201ENST00000607241 877 ntBASIC18.39■□□□□ 0.53
HNF4AP41235 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.39■□□□□ 0.53
HNF4AP41235 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.39■□□□□ 0.53
HNF4AP41235 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HNF4AP41235 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 AL135905.2-201ENST00000584934 1404 ntBASIC18.39■□□□□ 0.53
HNF4AP41235 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.39■□□□□ 0.53
HNF4AP41235 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HNF4AP41235 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HNF4AP41235 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HNF4AP41235 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.38■□□□□ 0.53
HNF4AP41235 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.38■□□□□ 0.53
HNF4AP41235 AC093503.3-201ENST00000624917 2352 ntBASIC18.38■□□□□ 0.53
HNF4AP41235 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.38■□□□□ 0.53
HNF4AP41235 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HNF4AP41235 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HNF4AP41235 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HNF4AP41235 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HNF4AP41235 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.38■□□□□ 0.53
HNF4AP41235 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HNF4AP41235 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.38■□□□□ 0.53
HNF4AP41235 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.38■□□□□ 0.53
HNF4AP41235 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HNF4AP41235 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.38■□□□□ 0.53
HNF4AP41235 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HNF4AP41235 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HNF4AP41235 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.38■□□□□ 0.53
HNF4AP41235 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HNF4AP41235 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HNF4AP41235 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.38■□□□□ 0.53
HNF4AP41235 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
HNF4AP41235 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HNF4AP41235 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.37■□□□□ 0.53
HNF4AP41235 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.37■□□□□ 0.53
HNF4AP41235 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HNF4AP41235 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HNF4AP41235 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HNF4AP41235 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HNF4AP41235 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HNF4AP41235 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HNF4AP41235 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HNF4AP41235 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HNF4AP41235 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HNF4AP41235 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HNF4AP41235 AC004980.1-204ENST00000429707 299 ntBASIC18.37■□□□□ 0.53
HNF4AP41235 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HNF4AP41235 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.37■□□□□ 0.53
HNF4AP41235 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HNF4AP41235 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.37■□□□□ 0.53
HNF4AP41235 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.37■□□□□ 0.53
HNF4AP41235 CD177P1-201ENST00000606252 935 ntBASIC18.37■□□□□ 0.53
HNF4AP41235 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.37■□□□□ 0.53
HNF4AP41235 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.37■□□□□ 0.53
HNF4AP41235 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms