Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC24.06■■□□□ 1.44
COL15A1P39059 MIR3180-5-201ENST00000583743 153 ntBASIC24.06■■□□□ 1.44
COL15A1P39059 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
COL15A1P39059 AC079602.3-201ENST00000623931 403 ntBASIC24.06■■□□□ 1.44
COL15A1P39059 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL15A1P39059 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL15A1P39059 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
COL15A1P39059 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL15A1P39059 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL15A1P39059 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL15A1P39059 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL15A1P39059 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
COL15A1P39059 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.06■■□□□ 1.44
COL15A1P39059 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL15A1P39059 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
COL15A1P39059 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL15A1P39059 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC24.06■■□□□ 1.44
COL15A1P39059 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL15A1P39059 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
COL15A1P39059 PPIH-202ENST00000372549 327 ntTSL 3 BASIC24.05■■□□□ 1.44
COL15A1P39059 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL15A1P39059 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
COL15A1P39059 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC24.05■■□□□ 1.44
COL15A1P39059 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24.05■■□□□ 1.44
COL15A1P39059 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC24.05■■□□□ 1.44
COL15A1P39059 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC24.05■■□□□ 1.44
COL15A1P39059 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.05■■□□□ 1.44
COL15A1P39059 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
COL15A1P39059 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL15A1P39059 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL15A1P39059 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.05■■□□□ 1.44
COL15A1P39059 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC24.05■■□□□ 1.44
COL15A1P39059 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.05■■□□□ 1.44
COL15A1P39059 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL15A1P39059 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL15A1P39059 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC24.04■■□□□ 1.44
COL15A1P39059 MCCD1P1-208ENST00000445732 328 ntBASIC24.04■■□□□ 1.44
COL15A1P39059 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC24.04■■□□□ 1.44
COL15A1P39059 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC24.04■■□□□ 1.44
COL15A1P39059 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC24.04■■□□□ 1.44
COL15A1P39059 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.04■■□□□ 1.44
COL15A1P39059 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC24.04■■□□□ 1.44
COL15A1P39059 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC24.04■■□□□ 1.44
COL15A1P39059 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
COL15A1P39059 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC24.04■■□□□ 1.44
COL15A1P39059 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.04■■□□□ 1.44
COL15A1P39059 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.04■■□□□ 1.44
COL15A1P39059 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
COL15A1P39059 GAS2L1P1-201ENST00000420145 1480 ntBASIC24.04■■□□□ 1.44
COL15A1P39059 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 AL162741.1-201ENST00000565563 1558 ntBASIC24.04■■□□□ 1.44
COL15A1P39059 AC093525.10-201ENST00000625130 1569 ntBASIC24.04■■□□□ 1.44
COL15A1P39059 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
COL15A1P39059 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL15A1P39059 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
COL15A1P39059 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.03■■□□□ 1.44
COL15A1P39059 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
COL15A1P39059 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC24.03■■□□□ 1.44
COL15A1P39059 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.03■■□□□ 1.44
COL15A1P39059 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
COL15A1P39059 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC24.03■■□□□ 1.44
COL15A1P39059 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC24.03■■□□□ 1.44
COL15A1P39059 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL15A1P39059 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC24.03■■□□□ 1.44
COL15A1P39059 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC24.03■■□□□ 1.44
COL15A1P39059 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.03■■□□□ 1.44
COL15A1P39059 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL15A1P39059 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL15A1P39059 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL15A1P39059 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
COL15A1P39059 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
COL15A1P39059 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
COL15A1P39059 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.03■■□□□ 1.44
COL15A1P39059 HLA-F-220ENST00000434407 884 ntBASIC24.03■■□□□ 1.44
COL15A1P39059 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC24.03■■□□□ 1.44
COL15A1P39059 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC24.03■■□□□ 1.44
COL15A1P39059 AP002414.4-201ENST00000589764 1148 ntBASIC24.03■■□□□ 1.44
COL15A1P39059 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.03■■□□□ 1.44
COL15A1P39059 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
COL15A1P39059 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.03■■□□□ 1.44
COL15A1P39059 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC24.02■■□□□ 1.44
COL15A1P39059 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.02■■□□□ 1.44
COL15A1P39059 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.02■■□□□ 1.44
COL15A1P39059 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC24.02■■□□□ 1.44
COL15A1P39059 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
COL15A1P39059 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
COL15A1P39059 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.02■■□□□ 1.44
COL15A1P39059 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms