Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
MS4A1P11836 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
MS4A1P11836 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC24.37■■□□□ 1.49
MS4A1P11836 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC24.37■■□□□ 1.49
MS4A1P11836 AC120498.9-201ENST00000339021 3867 ntBASIC24.37■■□□□ 1.49
MS4A1P11836 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
MS4A1P11836 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
MS4A1P11836 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
MS4A1P11836 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC24.37■■□□□ 1.49
MS4A1P11836 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MS4A1P11836 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.37■■□□□ 1.49
MS4A1P11836 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
MS4A1P11836 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.37■■□□□ 1.49
MS4A1P11836 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.37■■□□□ 1.49
MS4A1P11836 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MS4A1P11836 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
MS4A1P11836 AC131212.4-201ENST00000623606 975 ntBASIC24.37■■□□□ 1.49
MS4A1P11836 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MS4A1P11836 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC24.37■■□□□ 1.49
MS4A1P11836 USP39-202ENST00000409025 1946 ntTSL 5 BASIC24.37■■□□□ 1.49
MS4A1P11836 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
MS4A1P11836 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC24.37■■□□□ 1.49
MS4A1P11836 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
MS4A1P11836 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC24.37■■□□□ 1.49
MS4A1P11836 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.36■■□□□ 1.49
MS4A1P11836 USP49-202ENST00000373010 2446 ntTSL 5 BASIC24.36■■□□□ 1.49
MS4A1P11836 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MS4A1P11836 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MS4A1P11836 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MS4A1P11836 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC24.36■■□□□ 1.49
MS4A1P11836 COMP-202ENST00000425807 2292 ntTSL 2 BASIC24.36■■□□□ 1.49
MS4A1P11836 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC24.36■■□□□ 1.49
MS4A1P11836 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MS4A1P11836 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MS4A1P11836 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
MS4A1P11836 NIFKP9-201ENST00000419265 221 ntBASIC24.36■■□□□ 1.49
MS4A1P11836 AL353807.1-201ENST00000427475 662 ntBASIC24.36■■□□□ 1.49
MS4A1P11836 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
MS4A1P11836 MIR4651-201ENST00000582622 73 ntBASIC24.36■■□□□ 1.49
MS4A1P11836 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MS4A1P11836 GAS2L1P1-201ENST00000420145 1480 ntBASIC24.36■■□□□ 1.49
MS4A1P11836 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MS4A1P11836 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC24.36■■□□□ 1.49
MS4A1P11836 AL031598.1-201ENST00000561511 1773 ntBASIC24.36■■□□□ 1.49
MS4A1P11836 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
MS4A1P11836 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
MS4A1P11836 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC24.35■■□□□ 1.49
MS4A1P11836 KRT8P41-201ENST00000533985 1514 ntBASIC24.35■■□□□ 1.49
MS4A1P11836 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
MS4A1P11836 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
MS4A1P11836 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MS4A1P11836 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MS4A1P11836 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
MS4A1P11836 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MS4A1P11836 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.35■■□□□ 1.49
MS4A1P11836 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
MS4A1P11836 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.35■■□□□ 1.49
MS4A1P11836 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC24.35■■□□□ 1.49
MS4A1P11836 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC24.35■■□□□ 1.49
MS4A1P11836 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.35■■□□□ 1.49
MS4A1P11836 C1QBPP2-201ENST00000528754 825 ntBASIC24.35■■□□□ 1.49
MS4A1P11836 MMD2-204ENST00000612910 778 ntTSL 5 BASIC24.35■■□□□ 1.49
MS4A1P11836 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
MS4A1P11836 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.35■■□□□ 1.49
MS4A1P11836 AC090164.3-201ENST00000610780 2143 ntBASIC24.35■■□□□ 1.49
MS4A1P11836 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC24.35■■□□□ 1.49
MS4A1P11836 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
MS4A1P11836 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MS4A1P11836 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
MS4A1P11836 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
MS4A1P11836 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
MS4A1P11836 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
MS4A1P11836 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.34■■□□□ 1.49
MS4A1P11836 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC24.34■■□□□ 1.49
MS4A1P11836 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
MS4A1P11836 AC093525.10-201ENST00000625130 1569 ntBASIC24.34■■□□□ 1.49
MS4A1P11836 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
MS4A1P11836 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.34■■□□□ 1.49
MS4A1P11836 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
MS4A1P11836 TSPY23P-201ENST00000440136 739 ntBASIC24.34■■□□□ 1.49
MS4A1P11836 KSR1P1-201ENST00000446298 240 ntBASIC24.34■■□□□ 1.49
MS4A1P11836 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
MS4A1P11836 AP002982.1-201ENST00000492365 877 ntBASIC24.34■■□□□ 1.49
MS4A1P11836 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.34■■□□□ 1.49
MS4A1P11836 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.34■■□□□ 1.49
MS4A1P11836 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC24.34■■□□□ 1.49
MS4A1P11836 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
MS4A1P11836 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.34■■□□□ 1.49
MS4A1P11836 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MS4A1P11836 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MS4A1P11836 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.33■■□□□ 1.49
MS4A1P11836 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MS4A1P11836 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
MS4A1P11836 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MS4A1P11836 FAM201B-201ENST00000458407 597 ntBASIC24.33■■□□□ 1.49
MS4A1P11836 Z85996.1-201ENST00000494644 937 ntBASIC24.33■■□□□ 1.49
MS4A1P11836 RPPH1-201ENST00000516869 333 ntBASIC24.33■■□□□ 1.49
MS4A1P11836 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.33■■□□□ 1.49
MS4A1P11836 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
MS4A1P11836 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms