Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CD48P09326 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CD48P09326 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.66■□□□□ 0.74
CD48P09326 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.66■□□□□ 0.74
CD48P09326 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.66■□□□□ 0.74
CD48P09326 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.66■□□□□ 0.74
CD48P09326 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CD48P09326 AC083906.6-201ENST00000641366 219 ntBASIC19.66■□□□□ 0.74
CD48P09326 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CD48P09326 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.65■□□□□ 0.74
CD48P09326 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.65■□□□□ 0.74
CD48P09326 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.65■□□□□ 0.74
CD48P09326 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.65■□□□□ 0.74
CD48P09326 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 B3GAT3P1-201ENST00000471720 806 ntBASIC19.65■□□□□ 0.74
CD48P09326 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.65■□□□□ 0.74
CD48P09326 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.65■□□□□ 0.74
CD48P09326 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.65■□□□□ 0.74
CD48P09326 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.65■□□□□ 0.74
CD48P09326 AC026271.3-201ENST00000571884 352 ntBASIC19.65■□□□□ 0.74
CD48P09326 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.65■□□□□ 0.74
CD48P09326 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.65■□□□□ 0.74
CD48P09326 CD177P1-201ENST00000606252 935 ntBASIC19.65■□□□□ 0.74
CD48P09326 AC130371.2-201ENST00000619443 611 ntBASIC19.65■□□□□ 0.74
CD48P09326 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.65■□□□□ 0.74
CD48P09326 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.65■□□□□ 0.74
CD48P09326 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
CD48P09326 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.65■□□□□ 0.74
CD48P09326 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CD48P09326 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.65■□□□□ 0.74
CD48P09326 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CD48P09326 Z98044.1-201ENST00000632503 1764 ntBASIC19.65■□□□□ 0.74
CD48P09326 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CD48P09326 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CD48P09326 WIZP1-201ENST00000531444 2299 ntBASIC19.64■□□□□ 0.74
CD48P09326 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CD48P09326 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 RPS2P55-201ENST00000397318 883 ntBASIC19.64■□□□□ 0.73
CD48P09326 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 UBE2SP1-201ENST00000450587 669 ntBASIC19.64■□□□□ 0.73
CD48P09326 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
CD48P09326 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.64■□□□□ 0.73
CD48P09326 AC107956.1-201ENST00000494359 873 ntBASIC19.64■□□□□ 0.73
CD48P09326 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CD48P09326 MIR6786-201ENST00000616843 113 ntBASIC19.64■□□□□ 0.73
CD48P09326 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.64■□□□□ 0.73
CD48P09326 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.64■□□□□ 0.73
CD48P09326 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.64■□□□□ 0.73
CD48P09326 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.64■□□□□ 0.73
CD48P09326 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 AC009113.1-201ENST00000570267 2443 ntBASIC19.64■□□□□ 0.73
CD48P09326 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD48P09326 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CD48P09326 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD48P09326 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.63■□□□□ 0.73
CD48P09326 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.63■□□□□ 0.73
CD48P09326 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms