Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PDGFBP01127 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PDGFBP01127 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PDGFBP01127 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDGFBP01127 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFBP01127 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.06■□□□□ 0.64
PDGFBP01127 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFBP01127 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFBP01127 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.06■□□□□ 0.64
PDGFBP01127 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFBP01127 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFBP01127 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.06■□□□□ 0.64
PDGFBP01127 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFBP01127 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.06■□□□□ 0.64
PDGFBP01127 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PDGFBP01127 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFBP01127 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFBP01127 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.06■□□□□ 0.64
PDGFBP01127 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.06■□□□□ 0.64
PDGFBP01127 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFBP01127 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.06■□□□□ 0.64
PDGFBP01127 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.06■□□□□ 0.64
PDGFBP01127 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.06■□□□□ 0.64
PDGFBP01127 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.06■□□□□ 0.64
PDGFBP01127 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFBP01127 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
PDGFBP01127 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.06■□□□□ 0.64
PDGFBP01127 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFBP01127 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFBP01127 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.06■□□□□ 0.64
PDGFBP01127 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PDGFBP01127 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 AC093909.1-201ENST00000504731 1122 ntBASIC19.05■□□□□ 0.64
PDGFBP01127 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.05■□□□□ 0.64
PDGFBP01127 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PDGFBP01127 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PDGFBP01127 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PDGFBP01127 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFBP01127 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.04■□□□□ 0.64
PDGFBP01127 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
PDGFBP01127 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.04■□□□□ 0.64
PDGFBP01127 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.04■□□□□ 0.64
PDGFBP01127 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.04■□□□□ 0.64
PDGFBP01127 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.04■□□□□ 0.64
PDGFBP01127 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.04■□□□□ 0.64
PDGFBP01127 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
PDGFBP01127 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.04■□□□□ 0.64
PDGFBP01127 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PDGFBP01127 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.04■□□□□ 0.64
PDGFBP01127 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.04■□□□□ 0.64
PDGFBP01127 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFBP01127 AC104417.2-201ENST00000562989 1793 ntBASIC19.04■□□□□ 0.64
PDGFBP01127 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.03■□□□□ 0.64
PDGFBP01127 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFBP01127 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.03■□□□□ 0.64
PDGFBP01127 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFBP01127 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFBP01127 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PDGFBP01127 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFBP01127 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFBP01127 PGAM5P1-201ENST00000518923 814 ntBASIC19.03■□□□□ 0.64
PDGFBP01127 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.03■□□□□ 0.64
PDGFBP01127 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.03■□□□□ 0.64
PDGFBP01127 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.03■□□□□ 0.64
PDGFBP01127 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.03■□□□□ 0.64
PDGFBP01127 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PDGFBP01127 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFBP01127 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms