Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.52■□□□□ 0.88
TIMP1P01033 AP001005.1-201ENST00000571755 1248 ntBASIC20.52■□□□□ 0.88
TIMP1P01033 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.52■□□□□ 0.88
TIMP1P01033 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP1P01033 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP1P01033 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TIMP1P01033 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TIMP1P01033 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.52■□□□□ 0.88
TIMP1P01033 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TIMP1P01033 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TIMP1P01033 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.52■□□□□ 0.87
TIMP1P01033 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TIMP1P01033 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TIMP1P01033 RNA5SP419-201ENST00000515908 135 ntBASIC20.51■□□□□ 0.87
TIMP1P01033 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.51■□□□□ 0.87
TIMP1P01033 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TIMP1P01033 AF238378.1-201ENST00000526806 358 ntBASIC20.51■□□□□ 0.87
TIMP1P01033 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.51■□□□□ 0.87
TIMP1P01033 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.51■□□□□ 0.87
TIMP1P01033 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.51■□□□□ 0.87
TIMP1P01033 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.51■□□□□ 0.87
TIMP1P01033 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TIMP1P01033 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.51■□□□□ 0.87
TIMP1P01033 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.51■□□□□ 0.87
TIMP1P01033 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TIMP1P01033 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.5■□□□□ 0.87
TIMP1P01033 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TIMP1P01033 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP1P01033 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP1P01033 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP1P01033 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP1P01033 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP1P01033 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP1P01033 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.5■□□□□ 0.87
TIMP1P01033 AL512408.1-201ENST00000569378 2000 ntBASIC20.5■□□□□ 0.87
TIMP1P01033 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP1P01033 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP1P01033 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP1P01033 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.5■□□□□ 0.87
TIMP1P01033 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.5■□□□□ 0.87
TIMP1P01033 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.5■□□□□ 0.87
TIMP1P01033 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TIMP1P01033 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TIMP1P01033 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TIMP1P01033 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.5■□□□□ 0.87
TIMP1P01033 GPR32P1-201ENST00000601788 811 ntBASIC20.5■□□□□ 0.87
TIMP1P01033 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TIMP1P01033 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TIMP1P01033 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TIMP1P01033 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.5■□□□□ 0.87
TIMP1P01033 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.5■□□□□ 0.87
TIMP1P01033 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP1P01033 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP1P01033 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.49■□□□□ 0.87
TIMP1P01033 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP1P01033 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.49■□□□□ 0.87
TIMP1P01033 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP1P01033 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP1P01033 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TIMP1P01033 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TIMP1P01033 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.49■□□□□ 0.87
TIMP1P01033 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.49■□□□□ 0.87
TIMP1P01033 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.49■□□□□ 0.87
TIMP1P01033 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TIMP1P01033 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.49■□□□□ 0.87
TIMP1P01033 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.49■□□□□ 0.87
TIMP1P01033 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TIMP1P01033 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TIMP1P01033 HOXB1-202ENST00000577092 1414 ntBASIC20.49■□□□□ 0.87
TIMP1P01033 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP1P01033 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TIMP1P01033 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TIMP1P01033 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TIMP1P01033 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP1P01033 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP1P01033 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP1P01033 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.48■□□□□ 0.87
TIMP1P01033 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP1P01033 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP1P01033 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP1P01033 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP1P01033 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.48■□□□□ 0.87
TIMP1P01033 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TIMP1P01033 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.48■□□□□ 0.87
TIMP1P01033 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.48■□□□□ 0.87
TIMP1P01033 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms