Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTIPO60759 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTIPO60759 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTIPO60759 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CYTIPO60759 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTIPO60759 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CYTIPO60759 AC211429.1-201ENST00000415277 523 ntBASIC16.92■□□□□ 0.3
CYTIPO60759 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.92■□□□□ 0.3
CYTIPO60759 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.92■□□□□ 0.3
CYTIPO60759 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.92■□□□□ 0.3
CYTIPO60759 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.92■□□□□ 0.3
CYTIPO60759 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.92■□□□□ 0.3
CYTIPO60759 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.92■□□□□ 0.3
CYTIPO60759 AC145285.6-201ENST00000604632 637 ntBASIC16.92■□□□□ 0.3
CYTIPO60759 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTIPO60759 AC012306.2-201ENST00000609350 630 ntBASIC16.92■□□□□ 0.3
CYTIPO60759 AC097493.4-201ENST00000641197 219 ntBASIC16.92■□□□□ 0.3
CYTIPO60759 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTIPO60759 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.92■□□□□ 0.3
CYTIPO60759 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTIPO60759 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CYTIPO60759 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CYTIPO60759 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTIPO60759 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTIPO60759 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CYTIPO60759 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.92■□□□□ 0.3
CYTIPO60759 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.92■□□□□ 0.3
CYTIPO60759 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CYTIPO60759 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CYTIPO60759 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.91■□□□□ 0.3
CYTIPO60759 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 LINC01568-207ENST00000641790 1380 ntBASIC16.91■□□□□ 0.3
CYTIPO60759 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CYTIPO60759 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CYTIPO60759 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 TSPY17P-201ENST00000450329 467 ntBASIC16.91■□□□□ 0.3
CYTIPO60759 AC128688.1-201ENST00000487626 519 ntBASIC16.91■□□□□ 0.3
CYTIPO60759 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.91■□□□□ 0.3
CYTIPO60759 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.91■□□□□ 0.3
CYTIPO60759 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.91■□□□□ 0.3
CYTIPO60759 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CYTIPO60759 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 AL023803.3-201ENST00000615559 522 ntBASIC16.91■□□□□ 0.3
CYTIPO60759 AC116562.4-202ENST00000641738 218 ntBASIC16.91■□□□□ 0.3
CYTIPO60759 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.91■□□□□ 0.3
CYTIPO60759 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.91■□□□□ 0.3
CYTIPO60759 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CYTIPO60759 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CYTIPO60759 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CYTIPO60759 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.9■□□□□ 0.3
CYTIPO60759 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.9■□□□□ 0.3
CYTIPO60759 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.9■□□□□ 0.3
CYTIPO60759 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.9■□□□□ 0.3
CYTIPO60759 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CYTIPO60759 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYTIPO60759 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYTIPO60759 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYTIPO60759 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CYTIPO60759 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYTIPO60759 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.9■□□□□ 0.3
CYTIPO60759 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
CYTIPO60759 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CYTIPO60759 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CYTIPO60759 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.9■□□□□ 0.3
CYTIPO60759 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.9■□□□□ 0.3
CYTIPO60759 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYTIPO60759 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.9■□□□□ 0.3
CYTIPO60759 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.9■□□□□ 0.3
CYTIPO60759 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.9■□□□□ 0.3
CYTIPO60759 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.9■□□□□ 0.3
CYTIPO60759 LINC01023-201ENST00000606054 436 ntBASIC16.9■□□□□ 0.3
CYTIPO60759 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.9■□□□□ 0.3
CYTIPO60759 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.9■□□□□ 0.3
CYTIPO60759 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.9■□□□□ 0.3
CYTIPO60759 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.9■□□□□ 0.3
CYTIPO60759 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.9■□□□□ 0.3
CYTIPO60759 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYTIPO60759 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYTIPO60759 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CYTIPO60759 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms