Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL691432.3-201ENST00000621860 400 ntBASIC22.17■■□□□ 1.14
CTNND1O60716 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.17■■□□□ 1.14
CTNND1O60716 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CTNND1O60716 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CTNND1O60716 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CTNND1O60716 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.17■■□□□ 1.14
CTNND1O60716 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CTNND1O60716 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTNND1O60716 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTNND1O60716 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTNND1O60716 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC22.16■■□□□ 1.14
CTNND1O60716 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC22.16■■□□□ 1.14
CTNND1O60716 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC22.16■■□□□ 1.14
CTNND1O60716 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC22.16■■□□□ 1.14
CTNND1O60716 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTNND1O60716 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTNND1O60716 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CTNND1O60716 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CTNND1O60716 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CTNND1O60716 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 LINC01006-201ENST00000333319 2292 ntBASIC22.15■■□□□ 1.14
CTNND1O60716 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.15■■□□□ 1.14
CTNND1O60716 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.15■■□□□ 1.14
CTNND1O60716 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 TSSC2-201ENST00000450217 709 ntBASIC22.15■■□□□ 1.14
CTNND1O60716 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.15■■□□□ 1.14
CTNND1O60716 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC22.15■■□□□ 1.14
CTNND1O60716 AC092329.2-201ENST00000598402 547 ntBASIC22.15■■□□□ 1.14
CTNND1O60716 VPS72-207ENST00000640458 689 ntTSL 5 BASIC22.15■■□□□ 1.14
CTNND1O60716 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CTNND1O60716 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CTNND1O60716 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.15■■□□□ 1.14
CTNND1O60716 AC016734.2-201ENST00000624325 1377 ntBASIC22.14■■□□□ 1.14
CTNND1O60716 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CTNND1O60716 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CTNND1O60716 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CTNND1O60716 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
CTNND1O60716 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.14■■□□□ 1.13
CTNND1O60716 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.14■■□□□ 1.13
CTNND1O60716 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.14■■□□□ 1.13
CTNND1O60716 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC22.14■■□□□ 1.13
CTNND1O60716 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CTNND1O60716 AL121672.3-201ENST00000608644 468 ntBASIC22.14■■□□□ 1.13
CTNND1O60716 AC112497.1-201ENST00000624824 639 ntBASIC22.14■■□□□ 1.13
CTNND1O60716 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
CTNND1O60716 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CTNND1O60716 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CTNND1O60716 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CTNND1O60716 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.13■■□□□ 1.13
CTNND1O60716 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CTNND1O60716 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CTNND1O60716 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CTNND1O60716 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
CTNND1O60716 HLA-F-220ENST00000434407 884 ntBASIC22.13■■□□□ 1.13
CTNND1O60716 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.13■■□□□ 1.13
CTNND1O60716 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.13■■□□□ 1.13
CTNND1O60716 BX276092.5-203ENST00000456199 560 ntBASIC22.13■■□□□ 1.13
CTNND1O60716 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.13■■□□□ 1.13
CTNND1O60716 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC22.13■■□□□ 1.13
CTNND1O60716 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC22.13■■□□□ 1.13
CTNND1O60716 AC079602.3-201ENST00000623931 403 ntBASIC22.13■■□□□ 1.13
CTNND1O60716 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.13■■□□□ 1.13
CTNND1O60716 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CTNND1O60716 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CTNND1O60716 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CTNND1O60716 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.13■■□□□ 1.13
CTNND1O60716 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CTNND1O60716 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CTNND1O60716 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.12■■□□□ 1.13
CTNND1O60716 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.12■■□□□ 1.13
CTNND1O60716 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.12■■□□□ 1.13
CTNND1O60716 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.12■■□□□ 1.13
CTNND1O60716 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC22.12■■□□□ 1.13
CTNND1O60716 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC22.12■■□□□ 1.13
CTNND1O60716 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.12■■□□□ 1.13
CTNND1O60716 MIR3652-201ENST00000579335 131 ntBASIC22.12■■□□□ 1.13
CTNND1O60716 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CTNND1O60716 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
CTNND1O60716 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms