Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LINC01548A6NM66 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LINC01548A6NM66 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
LINC01548A6NM66 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC01548A6NM66 AC007663.1-201ENST00000438948 1240 ntBASIC14.97□□□□□ -0.01
LINC01548A6NM66 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC01548A6NM66 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01548A6NM66 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LINC01548A6NM66 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01548A6NM66 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01548A6NM66 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LINC01548A6NM66 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC01548A6NM66 KRT18P22-201ENST00000402024 1347 ntBASIC14.96□□□□□ -0.01
LINC01548A6NM66 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC01548A6NM66 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LINC01548A6NM66 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LINC01548A6NM66 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.96□□□□□ -0.01
LINC01548A6NM66 SLC25A1P2-201ENST00000430693 912 ntBASIC14.96□□□□□ -0.01
LINC01548A6NM66 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC01548A6NM66 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
LINC01548A6NM66 AL353719.1-201ENST00000566847 864 ntBASIC14.96□□□□□ -0.01
LINC01548A6NM66 AC092338.2-201ENST00000568827 1415 ntBASIC14.96□□□□□ -0.01
LINC01548A6NM66 AC116562.4-202ENST00000641738 218 ntBASIC14.96□□□□□ -0.01
LINC01548A6NM66 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01548A6NM66 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01548A6NM66 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
LINC01548A6NM66 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 AC120498.9-201ENST00000339021 3867 ntBASIC14.95□□□□□ -0.02
LINC01548A6NM66 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 CCR12P-201ENST00000446203 998 ntBASIC14.95□□□□□ -0.02
LINC01548A6NM66 AP003041.3-201ENST00000527151 707 ntBASIC14.95□□□□□ -0.02
LINC01548A6NM66 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 FAM87A-204ENST00000613235 858 ntBASIC14.95□□□□□ -0.02
LINC01548A6NM66 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01548A6NM66 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01548A6NM66 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01548A6NM66 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
LINC01548A6NM66 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01548A6NM66 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01548A6NM66 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LINC01548A6NM66 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms